difference between assembly hg19 and GRCh37
Hi all.
I have already mapped my sequence files with hg19 (ucsc).
However, I found that dbVar was targeted on GRch73 not ucsc version.
It doesn't matter if I use dbVar variation files with my reported variant file using my sequence which is aligned with hg19 ucsc.
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What's your question? If you are asking about the difference between hg19 and GRCh37, they are more or less similar (you can read the discussion here) except one uses chr and the other doesn't
Hello mangfu100!
Questions similar to yours can already be found at:
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.
Cheers!
PS: Please see similar existing discussions. Thank you, Sam , for the pointer.