This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Tool: Filter VCFs with ExAC data

Hi folks,

The exome aggregation consortium, ExAC, just made genotype data of more than 65,000 exomes available. We updated GeneTalk's genotype frequency database, so that anyone can filter vcf files with this great data set.

Cheers,
peter

next-gen snvs exome filter

great, thanks for sharing!

The imminent release of gemini will include ExAC allele frequencies for each VCF variant loaded into the GEMINI database framework.

Hi Do you know if the release of gemini has added ExAC frequencies?.

It is available in the development repository on Github, but not yet as a formal release. I expect that to happen in the next several days.

Awesome @Aaronquinlan ... waiting to use it in our workflow.

Hi Aaron,

Is it launched yet?

0 answers

No answers yet.

Log in to answer this question.