How to use Cytoscape plugin: enhancedGraphics

Question

[pixie@bioinfo]

Hi,

I am trying to use the plugin enhancedGraphics in Cytoscape v3. For every node, I have 3 fold change values for 3 tissues and would like to display as barchart/heatstrips on the nodes. I am not able to figure out how to go about it.

Here is a link to their paper: http://f1000research.com/articles/3-147/v1#SF

I asked this in the cytoscape-helpdesk but got only the paper link for a reply.

I specifically want to generate something like Figure 2

Kindly help.

Thanks!

Answer 1

[Alex Reynolds]

If you read the paper, there is a link to downloads of sample files used to make their figures, including the one specifically for Figure 2. The plug-in site also has sample code descriptions for barcharts.