First of all I should say that I am not a biologist in any sense. I am a computer scientist and I would like to do some analysis on fMRI ROI intensities. Given imaging data, I would just like to get a simple list of numbers which assigns an intensity to each anatomical region, preferably with free software. Then I would happily do statistical analysis on these numbers, but first I need to extract them from the fMRI data.
What is the easiest way to achieve this?
I tried to install the Connectome Mapping toolkit, but could not get it to work as it had lots of dependencies and I guess they are not all backward compatible. I read about BrainVoyager which would certainly be great but it is unfortunately not free.
1 answer
Hello Macksa, your question seems to be neuroscience-specific. Maybe you will have better changes on getting it answered if you go to neurostars instead:
Biostars is dedicated to Bioinformatics.
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