Converting Ensembl Compara gene tree DNA alignment to corresponding amino acid alignment
Hello everyone,
I have Ensembl compara gene tree alignments (Compara.gene_trees.57.fasta.gz) in nucleotide format. According to documentation, it says that the file "contains the peptide alignment for every genetree in fasta format".
I was wondering what might be a handy tool to obtain the corresponding amino acid alignments from the file.
Thanks,
Ikram
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Here is the link from where I am downloading the data ftp://ftp.ensembl.org/pub/release-57/emf/ensembl-compara/homologies/