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2
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0
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266
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Answer: Answer: Finding orthologs between genome error
23 days ago by Adrian Altenhoff ★ 1.1k
0
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0
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216
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Answer: Answer: Mapping of OMA IDs to UniProtKB AC
5 weeks ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
1.0k
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Comment: Comment: OMA in AWS cloud
6 months ago by Adrian Altenhoff ★ 1.1k
2
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0
replies
1.0k
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Answer: Answer: OMA in AWS cloud
7 months ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
498
views
Answer: Answer: Downloading Microsyntenic Fasta Sequences with Varying Chromosome Formats
9 months ago by Adrian Altenhoff ★ 1.1k
1
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3
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1.2k
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Answer: Answer: syntax errors when running part3 all-against-all
13 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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749
views
Answer: Answer: Obtaining every"Protein ID" from a genome in OMA
15 months ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
437
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Answer: Answer: Error, (in LoadSpliceMap) string to parse is too long
15 months ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
720
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Answer: Answer: OMA standalone error during database conversion step: Matches between X/X have b
17 months ago by Adrian Altenhoff ★ 1.1k
0
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0
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471
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Answer: Answer: To generate genome-wise orthologs including paralogs from OMA
17 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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658
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Answer: Answer: Orthologs distances in OMA
2.0 years ago by Adrian Altenhoff ★ 1.1k
2
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0
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514
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Answer: Answer: Multiple OMA groups per uniprotID in OMAdb
2.0 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.3k
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Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
2.2 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.3k
views
Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
2.2 years ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
585
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Answer: Answer: Error while running All-against-All alignments in OMA
2.2 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
2.7k
views
Comment: Comment: Making python script for downloading genomes for OMA Analysis
2.4 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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715
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Answer: Answer: OMA speed
2.4 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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700
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Answer: Answer: OMA standalone "FileStat" error
2.4 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
832
views
Answer: Answer: OMA Internet connection error - SLURM
2.5 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
713
views
Answer: A: oma-cleanup cannot be executed
3.2 years ago by Adrian Altenhoff ★ 1.1k
3
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1
reply
1.1k
views
Answer: A: OMA standalone, parallelization
3.2 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
960
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Comment: C: Problem running OMA standalone
3.3 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
1.2k
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Comment: C: OMA-standalone and sequence gaps
3.3 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.2k
views
Answer: A: OMA-standalone and sequence gaps
3.3 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.1k
views
Comment: C: OMA Standalone 2.4.2: cannot write to .oma directory
3.3 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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1.7k
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Comment: C: OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
3.3 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
1.0k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.4 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.0k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.4 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.0k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.4 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.0k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.4 years ago by Adrian Altenhoff ★ 1.1k
4
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2
replies
1.6k
views
Answer: A: Error running OMA standalone at HOG computation step
3.4 years ago by Adrian Altenhoff ★ 1.1k
2
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1
reply
1.6k
views
Comment: C: Error running OMA standalone at HOG computation step
3.4 years ago by Adrian Altenhoff ★ 1.1k
2
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1
reply
1.6k
views
Answer: A: Error running OMA standalone at HOG computation step
updated 3.4 years ago by 142k • written 3.4 years ago by ★ 1.1k
1
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0
replies
1.2k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
3.5 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.2k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
3.5 years ago by Adrian Altenhoff ★ 1.1k
1
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1
reply
1.2k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
3.5 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.2k
views
Answer: A: Predicting Gene Ontology function in OMA for large datasets
3.5 years ago by Adrian Altenhoff ★ 1.1k
3
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1
reply
824
views
Answer: A: OMA standalone estimating memory use for bacterial genomes
3.6 years ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
1.0k
views
Answer: A: Alignment scores thresholds with DNA
3.8 years ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
1000
views
Comment: C: oma -c error report
3.8 years ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
894
views
Answer: A: can standalone OMA be used on protein fasta (not genome)
4.0 years ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
885
views
Answer: A: Clusters proteins at each taxonomic rank - OMA
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
773
views
Answer: A: Error, 'sequence 1 is too long' OMA Standalone
4.1 years ago by Adrian Altenhoff ★ 1.1k
0
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0
replies
1.9k
views
Comment: C: OMA not finding numpy; pip and wget failing
4.3 years ago by Adrian Altenhoff ★ 1.1k
1
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2
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1.9k
views
Comment: C: OMA not finding numpy; pip and wget failing
4.3 years ago by Adrian Altenhoff ★ 1.1k
2
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1
reply
1.7k
views
Answer: A: OMA error in stage 2 of 2 stage process
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 1.1k
4
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1
reply
1.9k
views
Answer: A: What exactly is OMA doing here ?
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 1.1k
0
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0
replies
2.1k
views
Answer: A: oma stack size error
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 1.1k
2
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1
reply
3.1k
views
Answer: A: Gene Gain/loss + Duplication Tree
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 1.1k
0
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0
replies
1.5k
views
Comment: C: Error in some hog codes using pyham
4.9 years ago by Adrian Altenhoff ★ 1.1k
124 results • Page 1 of 3
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