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2
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8
replies
3.7k
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Are there any GenomeStudio alternatives to process Illumina genotyping array?
genomestudio genotyping array illumina
2.2 years ago by Zhenyu Zhang ★ 1.2k
1
vote
0
replies
2.2k
views
How To Query Snp Against Genomic Features In R
snp genomic
updated 3.2 years ago by 20 • written 10.1 years ago by ★ 1.2k
8
votes
9
replies
7.1k
views
6 follow
single sample somatic variant calling software
somatic variants tumor pipeline ffpe
updated 3.6 years ago by • 0 • written 7.8 years ago by ★ 1.2k
1
vote
2
replies
1.0k
views
Looking for superfast heatmap algorithm
heatmap
4.0 years ago by Zhenyu Zhang ★ 1.2k
2
votes
3
replies
1.2k
views
Need recommendations of RNA-Seq somatic variant calling pipeline
RNA-Seq somatic variant
4.6 years ago by Zhenyu Zhang ★ 1.2k
0
votes
1
reply
1.0k
views
Any adaptive permutation R packages?
R permutation adaptive permutation
4.8 years ago by Zhenyu Zhang ★ 1.2k
4
votes
10
replies
7.1k
views
6 follow
tumor only variant calling tools
somatic mutation tumor ngs
updated 4.9 years ago by ▴ 40 • written 6.7 years ago by ★ 1.2k
0
votes
1
reply
3.4k
views
Eqtl Results Adjusted For Genomic Inflation Factor
eqtl genomic gwas
updated 7.0 years ago by ★ 3.0k • written 10.3 years ago by ★ 1.2k
0
votes
2
replies
2.4k
views
Missing Snp Variants In Two 10Mb Blocks On Chr1 And Chr9 In 1000 Genome Data?
snp variant 1000genomes
updated 7.2 years ago by 20 • written 10.2 years ago by ★ 1.2k
0
votes
3
replies
2.1k
views
LiftOver with zero-based UCSC chain file
liftover ucsc chain-file
updated 22 months ago by 43k • written 8.3 years ago by ★ 1.2k
0
votes
0
replies
1.9k
views
Impute2 race specific panel?
impute2 SNP CEU imputation
updated 2.4 years ago by 43k • written 8.9 years ago by ★ 1.2k
1
vote
2
replies
2.5k
views
help: smartpca plot population shift problem
SNP smartpca
updated 16 months ago by 43k • written 8.9 years ago by ★ 1.2k
0
votes
0
replies
1.8k
views
confusion about genotyping and imputation
genotype minor-allele algorithm imputation SNP
updated 23 months ago by 43k • written 9.1 years ago by ★ 1.2k
0
votes
0
replies
2.5k
views
Best practice for GWAS RNA-seq quantification
RPKM RNA-Seq NGS Quantification GWAS
updated 3.1 years ago by 43k • written 9.2 years ago by ★ 1.2k
0
votes
0
replies
2.3k
views
tumor sample SNP6 copy number calling
snp6 copy-number SNP tumor CNA
updated 23 months ago by 43k • written 9.2 years ago by ★ 1.2k
1
vote
0
replies
3.5k
views
MACH imputation result QC
SNP imputation qc rsq mach
updated 2.4 years ago by 43k • written 9.8 years ago by ★ 1.2k
0
votes
2
replies
2.9k
views
CNV calling for illumina 550k array
microarray 550k cnv genotype illumina
updated 2.4 years ago by 43k • written 9.8 years ago by ★ 1.2k
2
votes
4
replies
3.4k
views
TARGET data identifier (The Therapeutically Applicable Research to Generate Effective Treatments )
TARGET
updated 23 months ago by 43k • written 10.0 years ago by ★ 1.2k
4
votes
2
replies
4.2k
views
tools to download multiple files from SRA
TARGET SRA NCBI
updated 2.6 years ago by 43k • written 10.0 years ago by ★ 1.2k
1
vote
2
replies
2.7k
views
how to find tissue specific eqtls?
gwas eqtl
updated 2.6 years ago by 43k • written 10.0 years ago by ★ 1.2k
5
votes
4
replies
3.3k
views
gene set enrichment / GO
GSEA TFBS Gene-ontology
updated 2.7 years ago by 43k • written 10.0 years ago by ★ 1.2k
2
votes
1
reply
3.9k
views
what's special about smartpca vs regular pca
eigensoft smartpca PCA SNP
updated 2.7 years ago by 43k • written 10.1 years ago by ★ 1.2k
1
vote
0
replies
3.3k
views
Tcga Gene Id Conversion To Ensembl Or Hgnc
tcga gene ensembl
10.2 years ago by Zhenyu Zhang ★ 1.2k
1
vote
2
replies
2.4k
views
Tag Snp, Independent Gwas, Eqtl Results
snp gwas eqtl
10.2 years ago by Zhenyu Zhang ★ 1.2k
24 results • Page 1 of 1
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