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Comment: Comment: VEP allele frequency from gnomAD genomes
2.3 years ago by bjwiley23 ▴ 20
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4.7k
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Comment: Comment: Symbolic alternate allele in the VCF ALT field
2.7 years ago by bjwiley23 ▴ 20
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1
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3.3k
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Comment: Comment: Is there a schema for CWL inputs/job files?
2.8 years ago by bjwiley23 ▴ 20
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9.1k
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Comment: Comment: fastx toolkit problem: fastq to fasta
3.0 years ago by bjwiley23 ▴ 20
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6.3k
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
3.1 years ago by bjwiley23 ▴ 20
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1
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9.5k
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Comment: C: GWAS in Plink - phenotype file format
3.1 years ago by bjwiley23 ▴ 20
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4.6k
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Comment: C: PSSM (Position Specific Scoring Matrix) from NCBI convert to matrix format
3.2 years ago by bjwiley23 ▴ 20
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536
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Filter multisample VCF for variants with less than N samples
VCF
3.2 years ago by bjwiley23 ▴ 20
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24k
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Comment: C: What is the right illumina universal adapter sequence for trimming paired-end re
3.2 years ago by bjwiley23 ▴ 20
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0
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14k
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Comment: C: How accurate is the IBD calculation by plink?
3.3 years ago by bjwiley23 ▴ 20
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1
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720
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APT rma-sketch gene has same values as exon - Affymetrix Human Exon 1.0 ST Array
APT exon-array
updated 3.3 years ago by 87k • written 3.3 years ago by ▴ 20
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2.4k
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Comment: C: issue in the vcf format using Mutect2
3.3 years ago by bjwiley23 ▴ 20
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0
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14k
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Comment: C: Adding asterisks to a ggplot2 bar plot to show significance
3.3 years ago by bjwiley23 ▴ 20
0
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1
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4.5k
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Comment: C: GATK DepthOfCoverage: 'total coverage' and 'mean coverage' meaning
3.3 years ago by bjwiley23 ▴ 20
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3.2k
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Comment: C: Might @PG headers affect downstream analyses, and how can I safely remove them f
3.3 years ago by bjwiley23 ▴ 20
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4.2k
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Comment: C: Difference between exon positions in hg19 and b37?
3.3 years ago by bjwiley23 ▴ 20
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0
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4.5k
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Comment: C: Filtering on the minor allele in VCFtools
3.3 years ago by bjwiley23 ▴ 20
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1
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2.6k
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Comment: C: I got a problem with making normal reference using cnvkit
3.3 years ago by bjwiley23 ▴ 20
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0
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3.4k
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Comment: C: GC model file
3.3 years ago by bjwiley23 ▴ 20
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0
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8.1k
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Comment: C: Genetic Map file format: how to understand the combined_rate column and the gene
3.3 years ago by bjwiley23 ▴ 20
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6.4k
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Comment: C: visualizing the file with BigWig format
3.4 years ago by bjwiley23 ▴ 20
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1
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3.5k
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Comment: C: RPKM and TPM calculation
3.4 years ago by bjwiley23 ▴ 20
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0
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12k
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Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.2 years ago by 43k • written 3.5 years ago by ▴ 20
1
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0
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24k
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Comment: C: read.table does not read in all rows!
3.6 years ago by bjwiley23 ▴ 20
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0
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15k
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Comment: C: Biopython - calculating query coverage and Identity
3.6 years ago by bjwiley23 ▴ 20
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0
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15k
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Comment: C: Biopython - calculating query coverage and Identity
3.6 years ago by bjwiley23 ▴ 20
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0
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11k
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Comment: C: Partial or complete overlap of two genomic ranges
3.6 years ago by bjwiley23 ▴ 20
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1
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9.0k
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Comment: C: Using The Biomart Perl Api For Simple Queries
3.6 years ago by bjwiley23 ▴ 20
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1
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1.1k
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Comment: C: getGEO not returning correct sample names
3.7 years ago by bjwiley23 ▴ 20
1
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3
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1.1k
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getGEO not returning correct sample names
getGEO R
3.7 years ago by bjwiley23 ▴ 20
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0
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3.9k
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Comment: C: RSEM calculate expression troubleshoot
3.7 years ago by bjwiley23 ▴ 20
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1
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3.9k
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Comment: C: RSEM calculate expression troubleshoot
3.7 years ago by bjwiley23 ▴ 20
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0
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3.0k
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Comment: C: Bioperl Seqio Reset (Next_Seq())
3.8 years ago by bjwiley23 ▴ 20
1
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2
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4.6k
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Answer: A: PSSM (Position Specific Scoring Matrix) from NCBI convert to matrix format
3.9 years ago by bjwiley23 ▴ 20
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0
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5.0k
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Comment: C: parsing BAM index (quick&dirty samtools view X.bam region)
4.1 years ago by bjwiley23 ▴ 20
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1
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4.5k
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Comment: C: What is Left align and parsimonious (VCF normalisation) ?
4.1 years ago by bjwiley23 ▴ 20
0
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1
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4.5k
views
Comment: A: What is Left align and parsimonious (VCF normalisation) ?
4.1 years ago by bjwiley23 ▴ 20
37 results • Page 1 of 1
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