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Comment: Comment: How Can We Find The Info For 3'Utr And 5'Utr In Gencode Gtf File?
15 days ago by cmdcolin ★ 3.8k
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504
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Comment: Comment: Load a full GFF3 into annotation track using arrow (Apollo)
22 days ago by cmdcolin ★ 3.8k
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354
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Comment: Comment: Best genome browser for manual curation of gene structure(s)?
29 days ago by cmdcolin ★ 3.8k
3
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1
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354
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Answer: Answer: Best genome browser for manual curation of gene structure(s)?
4 weeks ago by cmdcolin ★ 3.8k
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1
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546
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Answer: Answer: Is it possible to set different tracks to the same scale in JBrowse
4 weeks ago by cmdcolin ★ 3.8k
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0
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627
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
5 weeks ago by cmdcolin ★ 3.8k
0
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1
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627
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
5 weeks ago by cmdcolin ★ 3.8k
1
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1
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627
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
5 weeks ago by cmdcolin ★ 3.8k
1
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1
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627
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
5 weeks ago by cmdcolin ★ 3.8k
1
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0
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299
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Comment: Comment: Forgot the web site with comparison of NGS platforms
6 weeks ago by cmdcolin ★ 3.8k
1
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1
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627
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
6 weeks ago by cmdcolin ★ 3.8k
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1
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297
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Comment: Comment: comparing VCF files
6 weeks ago by cmdcolin ★ 3.8k
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1.6k
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Comment: Comment: How to calculate coverage of Nanopore long read data?
8 weeks ago by cmdcolin ★ 3.8k
2
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0
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289
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Answer: Answer: gene alignment (microsynteny)
10 weeks ago by cmdcolin ★ 3.8k
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1
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620
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Answer: Answer: hg38 goldenPath cpgIsland is down?
3 months ago by cmdcolin ★ 3.8k
1
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1
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265
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Comment: Comment: How can I view the information in an alternative allele?
3 months ago by cmdcolin ★ 3.8k
2
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0
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370
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Answer: Answer: Impossible gene fusion annotations
3 months ago by cmdcolin ★ 3.8k
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0
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607
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Comment: Comment: How to visualize multiple bacterial genomes with circos?
3 months ago by cmdcolin ★ 3.8k
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1
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437
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Comment: Comment: Querying nr_clustered database using BLAST REST API?
3 months ago by cmdcolin ★ 3.8k
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1
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437
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Comment: Comment: Querying nr_clustered database using BLAST REST API?
3 months ago by cmdcolin ★ 3.8k
1
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5
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437
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Querying nr_clustered database using BLAST REST API?
blast clustered
updated 3 months ago by 142k • written 3 months ago by ★ 3.8k
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2.9k
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Comment: Comment: How to get RID from blast rest api url using php
3 months ago by cmdcolin ★ 3.8k
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0
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471
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Answer: Answer: Bacterial Synteny Tools
3 months ago by cmdcolin ★ 3.8k
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1
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566
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Comment: Comment: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
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1
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566
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Comment: Comment: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
1
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2
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566
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Answer: Answer: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
1
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0
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993
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Comment: Comment: Where can I find a vcf file with individuals in it, that have a specific disease
4 months ago by cmdcolin ★ 3.8k
2
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1
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993
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Answer: Answer: Where can I find a vcf file with individuals in it, that have a specific disease
4 months ago by cmdcolin ★ 3.8k
2
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1
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1.3k
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Answer: Answer: extract sequence from genome by region
4 months ago by cmdcolin ★ 3.8k
0
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0
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460
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Comment: Comment: The Biostar Herald for Tuesday, December 19, 2023
4 months ago by cmdcolin ★ 3.8k
2
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0
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1.8k
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Answer: Answer: How to query 1000 genomes project VCF files for specific regions without downloa
4 months ago by cmdcolin ★ 3.8k
0
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0
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878
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Comment: Comment: Finding human .vcf files online to download
5 months ago by cmdcolin ★ 3.8k
1
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0
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690
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Comment: Comment: Fastest way to convert BED to GTF/GFF with gene_ids?
5 months ago by cmdcolin ★ 3.8k
0
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0
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13k
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Answer: Answer: Which program, tool, or strategy do you use to visualize genomic rearrangements?
5 months ago by cmdcolin ★ 3.8k
1
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1
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878
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Answer: Answer: Finding human .vcf files online to download
5 months ago by cmdcolin ★ 3.8k
0
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0
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370
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Comment: Comment: Annotate Unplaced Scaffold with Chromosome Information
5 months ago by cmdcolin ★ 3.8k
1
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0
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1.1k
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Comment: Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when
5 months ago by cmdcolin ★ 3.8k
0
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1
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593
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Comment: Comment: How can I map coordinates between two strains of yeast?
5 months ago by cmdcolin ★ 3.8k
0
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0
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866
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Comment: Comment: Circular genome browser
5 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
793
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Comment: Comment: How to overlap patient VCF with ClinVar database annotation using bedtools?
5 months ago by cmdcolin ★ 3.8k
1
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1
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595
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Answer: Answer: Finding exons that are always included
6 months ago by cmdcolin ★ 3.8k
0
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0
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635
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Comment: Comment: Strand bias in supplementary alignments from Nanopore
6 months ago by cmdcolin ★ 3.8k
1
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0
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3.3k
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Answer: Answer: Visualization of maf alignments in JBrowse
6 months ago by cmdcolin ★ 3.8k
3
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1
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635
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Comment: Comment: Strand bias in supplementary alignments from Nanopore
6 months ago by cmdcolin ★ 3.8k
0
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1
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579
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Answer: Answer: Browser based tool for generating protein alignment figure
6 months ago by cmdcolin ★ 3.8k
1
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1
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866
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Comment: Comment: Circular genome browser
6 months ago by cmdcolin ★ 3.8k
0
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1
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605
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Comment: Comment: Low coverage, deletion and startloss? What do we see here?
6 months ago by cmdcolin ★ 3.8k
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0
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1.2k
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Comment: Comment: Map genome positions onto protein coordinates?
6 months ago by cmdcolin ★ 3.8k
0
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1
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605
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Comment: Comment: Low coverage, deletion and startloss? What do we see here?
6 months ago by cmdcolin ★ 3.8k
0
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0
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631
views
Comment: Comment: How to make bam from start pos of read 1 and end pos of read 2 from paired end b
6 months ago by cmdcolin ★ 3.8k
511 results • Page 1 of 11
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