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Comment: Comment: Prinseq lite data preprocessing
17 months ago by thomas.welch ▴ 50
0
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1
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2.3k
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Comment: Comment: Prinseq lite data preprocessing
17 months ago by thomas.welch ▴ 50
0
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0
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757
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Comment: Comment: Reconcile reference transcriptome with reference genome from different labs with
19 months ago by thomas.welch ▴ 50
0
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1
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757
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Comment: Comment: Reconcile reference transcriptome with reference genome from different labs with
19 months ago by thomas.welch ▴ 50
1
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4
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757
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Reconcile reference transcriptome with reference genome from different labs with different naming schemes
proteomics transcriptomics transcdecoder annotation
updated 19 months ago by 142k • written 19 months ago by ▴ 50
2
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1
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848
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GVCF vs VCF INFO tags, relevance for filtering RNAseq SNPs
vcf snps gvcf gatk
updated 2.1 years ago by 161k • written 2.1 years ago by ▴ 50
0
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0
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383
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RNAseq SNP discovery: deciding upon filters and dealing with allele expression bias
SNP RNAseq transciptomics filtering GATK
2.2 years ago by thomas.welch ▴ 50
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1
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1.3k
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Comment: Comment: generating transcript to gene mapping with unhelpful GFF3 file
2.9 years ago by thomas.welch ▴ 50
2
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3
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1.3k
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generating transcript to gene mapping with unhelpful GFF3 file
salmon RNAseq transcriptome gff3
updated 2.9 years ago by 8.6k • written 2.9 years ago by ▴ 50
1
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0
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832
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Comment: Comment: reporting differentially expressed genes in a global RNA-seq study
3.0 years ago by thomas.welch ▴ 50
2
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2
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832
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Forum: reporting differentially expressed genes in a global RNA-seq study
DESeq2 RNA-seq expression heatmaps transcriptomics
3.0 years ago by thomas.welch ▴ 50
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6.0k
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Comment: C: Is there a way to get the name or IDs of genes with the goseq table?
3.9 years ago by thomas.welch ▴ 50
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2
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6.0k
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Comment: C: Is there a way to get the name or IDs of genes with the goseq table?
3.9 years ago by thomas.welch ▴ 50
6
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5
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2.9k
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Retrieving GO mappings for GOseq analysis with non-native organism
gene ontology GOseq topGO GAF gff
4.0 years ago by thomas.welch ▴ 50
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2.9k
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Answer: A: Retrieving GO mappings for GOseq analysis with non-native organism
4.0 years ago by thomas.welch ▴ 50
1
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1
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4.1k
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Comment: C: Hisat2 aligner problem
4.9 years ago by thomas.welch ▴ 50
5
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7
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5.7k
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merging a number of overlapping sanger sequences
merge sequence alignment
updated 5.7 years ago by ▴ 20 • written 6.7 years ago by ▴ 50
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0
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1.8k
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IGV indels not included in consensus sequence
IGV indels consensus sequence alignment ngs
updated 6.3 years ago by 20 • written 6.3 years ago by ▴ 50
1
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2
replies
1.3k
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large deletion detection in a haploid microbial eukaryote
structural variant haploid microbial sequencing
updated 7.2 years ago by 20k • written 7.2 years ago by ▴ 50
0
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1
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1.6k
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multiple sequence alignment for validation of large indels
multiple-sequence-alignment cnvnator indels
updated 12 months ago by 44k • written 7.3 years ago by ▴ 50
0
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0
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2.2k
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Comment: C: blastall vs bl2seq, and blastall fasta output
7.6 years ago by thomas.welch ▴ 50
0
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1
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2.2k
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Comment: C: blastall vs bl2seq, and blastall fasta output
7.6 years ago by thomas.welch ▴ 50
0
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1
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2.2k
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Comment: C: blastall vs bl2seq, and blastall fasta output
7.6 years ago by thomas.welch ▴ 50
3
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7
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2.2k
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blastall vs bl2seq, and blastall fasta output
blast blastall bl2seq blast+ fasta
7.6 years ago by thomas.welch ▴ 50
24 results • Page 1 of 1
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