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Comment: Comment: How to generate table_annovar from VCF input?
14 hours ago by Pierre Lindenbaum 161k
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232
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Comment: Comment: Sam file Header problem
15 hours ago by Pierre Lindenbaum 161k
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188
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Comment: Comment: getting exon coordinates
updated 1 day ago by 142k • written 1 day ago by 161k
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353
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Comment: Comment: finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame
1 day ago by Pierre Lindenbaum 161k
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232
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Comment: Comment: Sam file Header problem
1 day ago by Pierre Lindenbaum 161k
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1
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618
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Comment: Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
1 day ago by Pierre Lindenbaum 161k
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282
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Comment: Comment: Filtering VCF files based on VAF giving incorrect results
2 days ago by Pierre Lindenbaum 161k
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618
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Comment: Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
2 days ago by Pierre Lindenbaum 161k
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239
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Comment: Comment: Sequencing Depth (Read Depth) Calculations
2 days ago by Pierre Lindenbaum 161k
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183
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Comment: Comment: Cannot install bwa-mem2 via conda
updated 1 day ago by 43k • written 2 days ago by 161k
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215
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
2 days ago by Pierre Lindenbaum 161k
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215
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
2 days ago by Pierre Lindenbaum 161k
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215
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
2 days ago by Pierre Lindenbaum 161k
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260
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Comment: Comment: Annotating file using bcftools
2 days ago by Pierre Lindenbaum 161k
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695
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
2 days ago by Pierre Lindenbaum 161k
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177
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Comment: Comment: Is it necessary to do genotype quality filteration after snp calling with GATK
3 days ago by Pierre Lindenbaum 161k
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421
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Comment: Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
5 days ago by Pierre Lindenbaum 161k
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379
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
5 days ago by Pierre Lindenbaum 161k
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1
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379
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
5 days ago by Pierre Lindenbaum 161k
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1
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379
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
5 days ago by Pierre Lindenbaum 161k
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1
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421
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Comment: Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
6 days ago by Pierre Lindenbaum 161k
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1
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231
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Comment: Comment: java.nio.bufferunderflowexception haplotypecaller error for bqsr reads
6 days ago by Pierre Lindenbaum 161k
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282
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Comment: Comment: what is another word for a BLAST "hit"?
7 days ago by Pierre Lindenbaum 161k
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535
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Comment: Comment: In IGV is this a heterogeneous mutation or false call?
7 days ago by Pierre Lindenbaum 161k
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2
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535
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Comment: Comment: In IGV is this a heterogeneous mutation or false call?
7 days ago by Pierre Lindenbaum 161k
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285
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
7 days ago by Pierre Lindenbaum 161k
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1
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285
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
7 days ago by Pierre Lindenbaum 161k
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1
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455
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Comment: Comment: Different output for read length
8 days ago by Pierre Lindenbaum 161k
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299
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Comment: Comment: bcftools - reducing to "sites-only"?
8 days ago by Pierre Lindenbaum 161k
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1
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331
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Comment: Comment: How to convert normalized BigWig file to count matrix?
8 days ago by Pierre Lindenbaum 161k
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2.9k
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Comment: Comment: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
8 days ago by Pierre Lindenbaum 161k
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232
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Comment: Comment: Nextflow: how to get the process work dir, within the process
8 days ago by Pierre Lindenbaum 161k
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265
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Comment: Comment: Help with Biopython for Beginner
updated 8 days ago by 43k • written 8 days ago by 161k
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1
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695
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
10 days ago by Pierre Lindenbaum 161k
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1
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766
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Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
21 days ago by Pierre Lindenbaum 161k
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1
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766
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Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
21 days ago by Pierre Lindenbaum 161k
1
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1
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418
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Comment: Comment: Why gatk VariantAnnotator required bam and coverage files
22 days ago by Pierre Lindenbaum 161k
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1
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453
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Comment: Comment: Figures are disappeared from html report of SnpEff
22 days ago by Pierre Lindenbaum 161k
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540
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Comment: Comment: Fetch table from clinvar database according to a list of rsid
22 days ago by Pierre Lindenbaum 161k
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0
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949
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Comment: Comment: Adding CB tag to bam file
22 days ago by Pierre Lindenbaum 161k
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1
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540
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Comment: Comment: Fetch table from clinvar database according to a list of rsid
22 days ago by Pierre Lindenbaum 161k
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1
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312
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Comment: Comment: Annovar using R package
23 days ago by Pierre Lindenbaum 161k
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254
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Comment: Comment: The Biostar Herald for Tuesday, April 23, 2024
24 days ago by Pierre Lindenbaum 161k
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481
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Comment: Comment: Using vg gamsort with naive sorting algorithm
24 days ago by Pierre Lindenbaum 161k
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209
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Comment: Comment: Plot DNA methylation level of DMR on the basis of certain genes
24 days ago by Pierre Lindenbaum 161k
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300
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Comment: Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
24 days ago by Pierre Lindenbaum 161k
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1
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300
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Comment: Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
24 days ago by Pierre Lindenbaum 161k
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1
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380
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Comment: Comment: interpretartion of a vcf file
24 days ago by Pierre Lindenbaum 161k
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1
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446
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Comment: Comment: How to slice a gvcf file with tabix?
24 days ago by Pierre Lindenbaum 161k
0
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1
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446
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Comment: Comment: How to slice a gvcf file with tabix?
updated 24 days ago by 142k • written 24 days ago by 161k
7,563 results • Page 1 of 152
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