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Answer: Answer: How goes gene length effect the number of reads mapped
17 hours ago by i.sudbery 19k
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170
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Answer: Answer: What purposes can TPM values be used for?
17 hours ago by i.sudbery 19k
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168
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Comment: Comment: Alternatives to metanalyisis. P integration. Horiztonal integration RNA-seq
1 day ago by i.sudbery 19k
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
2 days ago by i.sudbery 19k
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489
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Comment: Comment: Low mapping rate with Salmon
2 days ago by i.sudbery 19k
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
3 days ago by i.sudbery 19k
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290
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Comment: Comment: ChIP-seq datasets: input samples omitted?
3 days ago by i.sudbery 19k
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142
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix)?
4 days ago by i.sudbery 19k
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
4 days ago by i.sudbery 19k
1
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0
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
4 days ago by i.sudbery 19k
0
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1
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489
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Comment: Comment: Low mapping rate with Salmon
6 days ago by i.sudbery 19k
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330
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Comment: Comment: what is the purpose of indexing the reference genome (Kallisto)
6 days ago by i.sudbery 19k
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341
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
9 days ago by i.sudbery 19k
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489
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Comment: Comment: Low mapping rate with Salmon
10 days ago by i.sudbery 19k
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480
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Comment: Comment: Marking duplicates using UMIs
10 days ago by i.sudbery 19k
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480
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Comment: Comment: Marking duplicates using UMIs
11 days ago by i.sudbery 19k
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254
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Answer: Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
17 days ago by i.sudbery 19k
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1.2k
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Comment: Comment: How I know if it is a batch effect or are real differences between my controls a
24 days ago by i.sudbery 19k
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1.2k
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Answer: Answer: ¿How I know if it is a batch effect or are real differences between my controls
24 days ago by i.sudbery 19k
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1
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433
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Comment: Comment: chromHMM annotations
24 days ago by i.sudbery 19k
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433
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Answer: Answer: chromHMM annotations
27 days ago by i.sudbery 19k
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419
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Comment: Comment: DESeq: too low p-value for RNAseq
28 days ago by i.sudbery 19k
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388
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Comment: Comment: Mathematical/Statistical models to predict mRNA half-life
6 weeks ago by i.sudbery 19k
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452
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Answer: Answer: UMI_extract for paired end reads of micro_RNA
7 weeks ago by i.sudbery 19k
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189
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Answer: Answer: Detecting presence of UMI from BAM/fastq files without prior knowledge
7 weeks ago by i.sudbery 19k
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1
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510
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Answer: Answer: conda install -Killed
7 weeks ago by i.sudbery 19k
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368
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Answer: Answer: Is it feasible to merge Illumina RNA-Seq data with varying read lengths?
7 weeks ago by i.sudbery 19k
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211
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Comment: Comment: RNA-seq DE with AAV injection
7 weeks ago by i.sudbery 19k
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649
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Comment: Comment: Difference between GLM and Wilcoxon rank sum test
8 weeks ago by i.sudbery 19k
3
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1
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649
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Answer: Answer: Difference between GLM and Wilcoxon rank sum test
8 weeks ago by i.sudbery 19k
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536
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Comment: Comment: minimap2 gets killed, but it doesn't explain why
8 weeks ago by i.sudbery 19k
2
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272
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Answer: Answer: Error from cgat gtf2gtf --method=genes-to-unique-chunks
9 weeks ago by i.sudbery 19k
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0
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589
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Comment: Comment: Multiple unique reads sharing same UMI barcode
9 weeks ago by i.sudbery 19k
2
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1
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801
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Answer: Answer: How to interpret the output from a DESeq2 WALD test analysis in R to compare gen
9 weeks ago by i.sudbery 19k
0
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1
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589
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Comment: Comment: Multiple unique reads sharing same UMI barcode
9 weeks ago by i.sudbery 19k
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1
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589
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Comment: Comment: Multiple unique reads sharing same UMI barcode
9 weeks ago by i.sudbery 19k
1
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1
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385
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Answer: Answer: perplexed regarding the process of gene expression normalision
9 weeks ago by i.sudbery 19k
1
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0
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294
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Answer: Answer: Heteroscedasticity in RNA-seq data
11 weeks ago by i.sudbery 19k
2
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0
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652
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Answer: Answer: question on how differential expression is affected if there is differential abu
11 weeks ago by i.sudbery 19k
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0
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410
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Comment: Comment: Enrichment Analysis with Fisher's exact test
11 weeks ago by i.sudbery 19k
2
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2
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410
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Answer: Answer: Enrichment Analysis with Fisher's exact test
11 weeks ago by i.sudbery 19k
0
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0
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289
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Answer: Answer: Calling variants with UMI-collapsed duplex consensus reads
11 weeks ago by i.sudbery 19k
2
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1
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433
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Answer: Answer: UMI workflow resulting in bams with empty reads
11 weeks ago by i.sudbery 19k
0
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0
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404
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Comment: Comment: How to fix DESeq2 Error in checkFullRank(modelMatrix)
12 weeks ago by i.sudbery 19k
3
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1
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404
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Answer: Answer: How to fix DESeq2 Error in checkFullRank(modelMatrix)
12 weeks ago by i.sudbery 19k
1
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1
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523
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Comment: Comment: How to predication/annotation trans-splicing in genome
3 months ago by i.sudbery 19k
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0
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431
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Comment: Comment: Difference between mRNA and transcript record types in GFF3 and GTF
3 months ago by i.sudbery 19k
2
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1
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431
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Comment: Comment: Difference between mRNA and transcript record types in GFF3 and GTF
3 months ago by i.sudbery 19k
7
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630
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Answer: Answer: Why employ normalization methods, and how can they be utilized in DEG analysis?
3 months ago by i.sudbery 19k
0
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0
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253
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Answer: Answer: Is it possible to identify the strand of an RNA using UMI?
3 months ago by i.sudbery 19k
1,495 results • Page 1 of 30
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