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questions
0
votes
1
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108
views
monocle3 dot plot by groups and each cell types
monocle3
R
updated 22 hours ago by
zx8754
11k • written 1 day ago by
sooni
▴ 20
0
votes
1
reply
149
views
GO analysis: Indicate genes corresponding to the pathway
GeneOntoloy
GO
R
updated 9 days ago by
marco.barr
▴ 140 • written 9 days ago by
sooni
▴ 20
0
votes
4
replies
270
views
GO analysis: p-value range
GO
R
updated 9 days ago by
Matthias Zepper
4.6k • written 10 days ago by
sooni
▴ 20
2
votes
3
replies
282
views
ggrepel function: geom_text_repel()
ggplot2
ggrepel
R
updated 13 days ago by
Ram
44k • written 14 days ago by
sooni
▴ 20
1
vote
1
reply
244
views
DESeq2 error
DESeq2
updated 19 days ago by
ATpoint
83k • written 20 days ago by
sooni
▴ 20
0
votes
1
reply
187
views
PseudobulkExpression.Seurat error
Seurat
pseudo-bulk
updated 21 days ago by
Bastien Hervé
5.3k • written 22 days ago by
sooni
▴ 20
1
vote
5
replies
523
views
HCL database download
HCL
updated 22 days ago by
Ram
44k • written 26 days ago by
sooni
▴ 20
3
votes
1
reply
314
views
Seurat merge and batch correction
Seurat
updated 5 weeks ago by
Ram
44k • written 5 weeks ago by
sooni
▴ 20
0
votes
0
replies
285
views
batch correction: cds from seurat
batch-correction
R
seurat
monocle3
cds
updated 7 weeks ago by
Ram
44k • written 7 weeks ago by
sooni
▴ 20
0
votes
3
replies
362
views
convert cds to seurat object
R
monocle3
seurat
updated 8 weeks ago by
edoardofilippi1998
• 0 • written 9 weeks ago by
sooni
▴ 20
0
votes
2
replies
272
views
DEG (Differential expression gene) analysis
DEG
R
updated 10 weeks ago by
dsull
★ 6.1k • written 10 weeks ago by
sooni
▴ 20
3
votes
10
replies
879
views
t-test in two groups, multiple rows
R
t-test
10 weeks ago by
sooni
▴ 20
4
votes
2
replies
383
views
no permission to install to directory
R
updated 11 weeks ago by
Ram
44k • written 12 weeks ago by
sooni
▴ 20
1
vote
1
reply
336
views
shotgun metagenomics degs analysis
deg
degs
shotgun
updated 3 months ago by
colindaven
6.4k • written 3 months ago by
sooni
▴ 20
0
votes
0
replies
192
views
KEGG orthology ID to E. coli gene symbol
symbol
KEGG
convert
4 months ago by
sooni
▴ 20
1
vote
3
replies
474
views
How to check a specific gene level in a specific genus?
microbiome
updated 4 months ago by
inedraylig
▴ 60 • written 4 months ago by
sooni
▴ 20
2
votes
5
replies
715
views
How to install MetaPhlAn3?
MetaPhlAn3
updated 4 months ago by
Philipp Bayer
8.5k • written 4 months ago by
sooni
▴ 20
1
vote
1
reply
467
views
DIAMOND tutorial
tutorial
DIAMOND
updated 6 months ago by
GenoMax
142k • written 6 months ago by
sooni
▴ 20
3
votes
2
replies
419
views
t-test by row
R
t-test
updated 6 months ago by
dthorbur
★ 2.0k • written 6 months ago by
sooni
▴ 20
0
votes
3
replies
647
views
Download NCBI data using sratoolkit in anaconda
NCBI
sratoolkit
anaconda
updated 7 months ago by
Ram
44k • written 7 months ago by
sooni
▴ 20
0
votes
0
replies
357
views
tidy_vcf function
tidy_vcf
manhattan
vcf
updated 8 months ago by
Pierre Lindenbaum
162k • written 8 months ago by
sooni
▴ 20
3
votes
3
replies
766
views
vcf.gz to vcf
VCF
updated 7 months ago by
Mark
★ 1.5k • written 8 months ago by
sooni
▴ 20
1
vote
1
reply
438
views
GWAS phenotype
R
GWAS
phenotype
updated 8 months ago by
dthorbur
★ 2.0k • written 8 months ago by
sooni
▴ 20
0
votes
5
replies
928
views
manhattan plot with vcf information
R
manhattan
vcf
updated 8 months ago by
dthorbur
★ 2.0k • written 8 months ago by
sooni
▴ 20
0
votes
0
replies
294
views
Install packages in old version Julia
package
Julia
8 months ago by
sooni
▴ 20
0
votes
1
reply
399
views
prediction dead time within 24 hours with TPM-rna seq data
Python
CYCLOPS
R
Julia
updated 8 months ago by
Ram
44k • written 8 months ago by
sooni
▴ 20
0
votes
4
replies
999
views
matching gnomAD allele frequency
R
python
gnomAD
9 months ago by
sooni
▴ 20
0
votes
2
replies
437
views
python 'gnomAD_DB'
gnomAD_DB
python
10 months ago by
sooni
▴ 20
3
votes
3
replies
1.3k
views
Is there any way to access gnomAD data from R?
R
gnomAD
updated 11 months ago by
Ming Tommy Tang
★ 3.9k • written 11 months ago by
sooni
▴ 20
2
votes
4
replies
1.2k
views
After R studio update, restrict view of columns in dataframe.
Rstudio
dataframe
R
updated 11 months ago by
Ming Tommy Tang
★ 3.9k • written 11 months ago by
sooni
▴ 20
2
votes
1
reply
4.2k
views
Seurat 'DoHeatmap()' hierarchical clustering
DoHeatmap
Seurat
clustering
updated 12 months ago by
fracarb8
★ 1.7k • written 12 months ago by
sooni
▴ 20
0
votes
0
replies
385
views
single cell RNA analysis in python
cell
single
python
12 months ago by
sooni
▴ 20
3
votes
4
replies
1.4k
views
How to convert chromosome locations to gene symbols?
symbol
location
chromosome
gene
updated 12 months ago by
Trivas
★ 1.8k • written 12 months ago by
sooni
▴ 20
2
votes
1
reply
439
views
'Seurat' package
Seurat
R
updated 12 months ago by
Ram
44k • written 12 months ago by
sooni
▴ 20
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