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301
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Comment: Comment: read length in structural variant calling
14 days ago by eebloom ▴ 80
0
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0
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503
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Comment: Comment: Downsampling long-read BAM files
14 days ago by eebloom ▴ 80
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1
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403
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Comment: Comment: Do I need to go back and filter my long-reads?
14 days ago by eebloom ▴ 80
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1
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403
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Comment: Comment: Do I need to go back and filter my long-reads?
14 days ago by eebloom ▴ 80
1
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7
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503
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Downsampling long-read BAM files
nanopore BAM QC ONT downsampling
14 days ago by eebloom ▴ 80
1
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1
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503
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Answer: Answer: Downsampling long-read BAM files
15 days ago by eebloom ▴ 80
0
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0
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550
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Comment: Comment: Downsampling fastq file
25 days ago by eebloom ▴ 80
1
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6
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403
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Do I need to go back and filter my long-reads?
alignment nanopore filtering QC ONT
updated 14 days ago by 142k • written 4 weeks ago by ▴ 80
1
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0
replies
177
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phasing tumor long-reads
nanopore ONT haplotag phasing tumor
8 days ago by eebloom ▴ 80
0
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1
reply
503
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Comment: Comment: Downsampling long-read BAM files
5 weeks ago by eebloom ▴ 80
1
vote
2
replies
301
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read length in structural variant calling
nanopore SV QC ONT variant
14 days ago by eebloom ▴ 80
0
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0
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309
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Comment: Comment: comparing VCF files
7 weeks ago by eebloom ▴ 80
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2
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309
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comparing VCF files
long-reads VCF variants ONT nanopore
7 weeks ago by eebloom ▴ 80
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0
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721
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Comment: Comment: somatic variant calling without matched normal in long-reads
7 weeks ago by eebloom ▴ 80
3
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5
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721
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somatic variant calling without matched normal in long-reads
variants cancer illumina ONT nanopore
7 weeks ago by eebloom ▴ 80
0
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0
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721
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Comment: Comment: somatic variant calling without matched normal in long-reads
3 months ago by eebloom ▴ 80
0
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0
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636
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Comment: Comment: Filtering long read data
4 months ago by eebloom ▴ 80
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0
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2.5k
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Comment: Comment: Basecalling with dorado
4 months ago by eebloom ▴ 80
2
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3
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636
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Filtering long read data
dorado alignment filtering QC nanopore
4 months ago by eebloom ▴ 80
1
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4
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1.1k
views
Filtering qscore on dorado
dorado filtering QC nanopore Guppy
15 days ago by eebloom ▴ 80
0
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0
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1.1k
views
Answer: Answer: Filtering qscore on dorado
15 days ago by eebloom ▴ 80
0
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1
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1.1k
views
Comment: Comment: Filtering qscore on dorado
6 months ago by eebloom ▴ 80
2
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6
replies
2.5k
views
Basecalling with dorado
variants dorado alignment methylation nanopore
4 months ago by eebloom ▴ 80
1
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0
replies
2.5k
views
Comment: Comment: Basecalling with dorado
updated 6 months ago by 6.4k • written 6 months ago by ▴ 80
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1
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2.5k
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Comment: Comment: Basecalling with dorado
7 months ago by eebloom ▴ 80
0
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1
reply
2.5k
views
Comment: Comment: Basecalling with dorado
7 months ago by eebloom ▴ 80
1
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0
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2.2k
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Answer: Answer: Minfi probe filtering
7 months ago by eebloom ▴ 80
0
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0
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952
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Comment: Comment: filtering sniffles variants for precise calls
11 months ago by eebloom ▴ 80
0
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2
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952
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filtering sniffles variants for precise calls
sniffles vcf variation
11 months ago by eebloom ▴ 80
0
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2
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697
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Comparing variant calls
bedtools VCF bcftools
updated 11 months ago by 43k • written 13 months ago by ▴ 80
0
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0
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359
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multiple testing in 450K array data
minfi methylation 450K epigenetics statistics
13 months ago by eebloom ▴ 80
2
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1
reply
546
views
Controlling for FDR in 450k methylation microarray data
minfi methylation 450k limma epigenetics
updated 14 months ago by 3.9k • written 14 months ago by ▴ 80
0
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0
replies
521
views
Bumphunter function in minfi
minfi methylation DMR bumphunter R
updated 14 months ago by 88k • written 14 months ago by ▴ 80
0
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0
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386
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updating annotation of illumina human methylation 450k data
minfi methylation 450k annotation infinium
15 months ago by eebloom ▴ 80
0
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1
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991
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Comment: Comment: Dealing with missing (NA) values in my 450K methylation array dataset
15 months ago by eebloom ▴ 80
1
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3
replies
991
views
Dealing with missing (NA) values in my 450K methylation array dataset
minfi PCA expression Methylation R
updated 15 months ago by ★ 2.0k • written 15 months ago by ▴ 80
0
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1
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799
views
Comment: Comment: Downloading 450k methylation data from GEO
15 months ago by eebloom ▴ 80
0
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3
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799
views
Downloading 450k methylation data from GEO
minfi 450K IDAT Methylation GEO
updated 15 months ago by 142k • written 15 months ago by ▴ 80
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