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comments
0
votes
0
replies
218
views
Comment:
Comment: How to handle duplicated genes in TCGA data?
8 hours ago by
Ngrin
• 0
0
votes
3
replies
218
views
How to handle duplicated genes in TCGA data?
TCGA
GDC
mRNA
8 hours ago by
Ngrin
• 0
0
votes
1
reply
270
views
Comment:
Comment: How to compute TPM normalized values for TCGA miRNA data?
11 days ago by
Ngrin
• 0
1
vote
3
replies
270
views
How to compute TPM normalized values for TCGA miRNA data?
TCGA
normalization
TPM
miRNA
updated 11 days ago by
swbarnes2
14k • written 11 days ago by
Ngrin
• 0
0
votes
1
reply
939
views
Comment:
Comment: TCGA2STAT Error: Firehose connection
24 days ago by
Ngrin
• 0
0
votes
1
reply
939
views
Comment:
Comment: TCGA2STAT Error: Firehose connection
24 days ago by
Ngrin
• 0
2
votes
1
reply
303
views
Compute p-value, having log fold change
p-value
fold-change
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
Ngrin
• 0
0
votes
0
replies
636
views
Comment:
Comment: Help in choosing the right metric for ranking genes in fgsea
3 months ago by
Ngrin
• 0
0
votes
0
replies
636
views
Comment:
Comment: Help in choosing the right metric for ranking genes in fgsea
3 months ago by
Ngrin
• 0
0
votes
1
reply
636
views
Comment:
Comment: Help in choosing the right metric for ranking genes in fgsea
3 months ago by
Ngrin
• 0
4
votes
7
replies
636
views
Help in choosing the right metric for ranking genes in fgsea
FGSEA
GSEA
3 months ago by
Ngrin
• 0
0
votes
0
replies
222
views
Find equivalent pathways between KEGG, Reactome, and WikiPathways
pathway
mapping
database
5 months ago by
Ngrin
• 0
1
vote
1
reply
546
views
Omics data and Mammography data repositories
repository
omics
mammography
updated 8 months ago by
aidangcruickshank
▴ 10 • written 8 months ago by
Ngrin
• 0
0
votes
0
replies
976
views
Comment:
Comment: zero byte files in sratoolkit.3.0.1-ubuntu64
16 months ago by
Ngrin
• 0
0
votes
1
reply
976
views
Comment:
Comment: zero byte files in sratoolkit.3.0.1-ubuntu64
16 months ago by
Ngrin
• 0
0
votes
1
reply
976
views
Comment:
Comment: zero byte files in sratoolkit.3.0.1-ubuntu64
16 months ago by
Ngrin
• 0
0
votes
1
reply
843
views
Error 134 while aligning using hisat2
hisat2
alignment
sam
bam
updated 15 months ago by
Fabio Marroni
★ 3.0k • written 16 months ago by
Ngrin
• 0
0
votes
1
reply
799
views
Comment:
Comment: Having two SRR records and accordingly four fastq files per sample, how should I
16 months ago by
Ngrin
• 0
3
votes
3
replies
799
views
Having two SRR records and accordingly four fastq files per sample, how should I deal with this?
fastq
sra-toolkit
rna-seq
updated 16 months ago by
ATpoint
82k • written 16 months ago by
Ngrin
• 0
0
votes
0
replies
394
views
RNA-seq datasets with raw read counts for two group comparison
RNA-seq
updated 16 months ago by
Ram
43k • written 16 months ago by
Ngrin
• 0
0
votes
0
replies
356
views
Create VCF file to use as input for SIFT
SIFT
mutation
vcf
variant
18 months ago by
Ngrin
• 0
0
votes
0
replies
742
views
Comment:
Comment: High number of unmapped reads in STAR
19 months ago by
Ngrin
• 0
0
votes
1
reply
742
views
Comment:
Comment: High number of unmapped reads in STAR
19 months ago by
Ngrin
• 0
0
votes
4
replies
742
views
High number of unmapped reads in STAR
read
count
alignement
STAR
genecount
19 months ago by
Ngrin
• 0
0
votes
0
replies
539
views
Sankey plot with not 100 percent node in R
Plot
R
RStudio
Pathway
GeneExpression
20 months ago by
Ngrin
• 0
0
votes
1
reply
683
views
Comment:
Comment: Star Create genome index files
20 months ago by
Ngrin
• 0
2
votes
3
replies
683
views
Star Create genome index files
genome
Alignment
STAR
updated 20 months ago by
ATpoint
82k • written 20 months ago by
Ngrin
• 0
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