Limit : this year
all time today this week this month this year
897 results • Page 1 of 18
Sort: Rank
Rank Views Votes Replies
2
votes
0
replies
11
views
News: course on Landscape Genomics at the EPFL in Lausanne (June 17-21)
LandscapeGenomics SNPs LocalAdaptation GIS
1 hour ago by carlopecoraro2 ★ 2.5k
795
votes
167
replies
143k
views
109 follow
News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 3 months ago by 2.7k • written 7.4 years ago by 100k
0
votes
0
replies
93
views
News: Online course: Introduction to Deep Learning
Python Deep-Learning Convolutional-Neural-Network Machine-Learning
updated 22 hours ago by 43k • written 1 day ago by ★ 2.5k
0
votes
0
replies
108
views
News: Online course. -Time series analysis and Forecasting in R
Time-Series Forecasting R Stastics
2 days ago by carlopecoraro2 ★ 2.5k
1
vote
2
replies
247
views
News: We created a Bioinformatics Competition for Spatial Transcriptomics: MICOS-EU
cell-clustering Spatial-transcriptomics
updated 2 days ago by • 0 • written 3 days ago by ▴ 10
0
votes
0
replies
109
views
News: Online course: Bioinformatic analysis of transposable elements
GenomeAssembly Transcriptomics TransposableElements ManualCuration
4 days ago by carlopecoraro2 ★ 2.5k
1
vote
2
replies
1.1k
views
News: The GDC Legacy Archive is retiring soon.
genomic-data-commons tcga gdc
4 days ago by Zhenyu Zhang ★ 1.2k
0
votes
0
replies
139
views
News: Cellosaurus release 49 is available
cell biocuration line database news knowledgebase
6 days ago by Amos Bairoch ▴ 120
0
votes
0
replies
108
views
News: Beyond beginner R: Advancing your coding skills - September 16-19
Advanced-Coding Programming R
updated 7 days ago by 43k • written 7 days ago by ★ 2.5k
0
votes
0
replies
169
views
News: Goodbye, Slow Code? How BioNumpy can Redefine Python’s Role in Bioinformatics!
BioNumPy Python NumPy
updated 9 days ago by 43k • written 9 days ago by • 0
0
votes
0
replies
135
views
News: Online course: Meta-analysis in R - last 2 seats left
Meta-Analysis Statistics R
updated 9 days ago by 43k • written 9 days ago by ★ 2.5k
0
votes
1
reply
297
views
News: FINAL CALL: 8th Berlin Summer School in NGS Data Analysis - Only a few last places available
DNA-seq variant-calling RNA-seq illumina transcriptomics
9 days ago by David Langenberger 11k
0
votes
0
replies
124
views
News: Online course: Genome Annotation
Genome-Assembly Genome-Annotation
10 days ago by carlopecoraro2 ★ 2.5k
3
votes
0
replies
223
views
News: Webinar “Learning Single-cell Atlases” with Dr. Fabian Theis, author of Scanpy on May 8
Scanpy Generative-AI scRNA Machine-Learning
updated 12 days ago by 43k • written 13 days ago by ▴ 60
0
votes
0
replies
176
views
News: Master Meta-analysis with R (May 13-16) - Online!
Meta-Analysis Statistics R
updated 13 days ago by 43k • written 14 days ago by ★ 2.5k
0
votes
0
replies
133
views
News: hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models GLM R
updated 15 days ago by 43k • written 15 days ago by ★ 2.5k
3
votes
0
replies
143
views
News: Interested in Spatial Omics?
Bioconductor Spatial-Omics Spatial-Transcriptomics
updated 16 days ago by 43k • written 16 days ago by ★ 2.5k
0
votes
0
replies
105
views
News: Online course: DNA methylation
Pacbio Nanopore DnaMethylation Evolution
17 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
150
views
News: upcoming online statistical courses
Statistics R Data-Analysis
updated 18 days ago by 43k • written 18 days ago by ★ 2.5k
0
votes
0
replies
213
views
News: Online course: Meta-analysis in R
Meta-Analysis Statistics R
updated 21 days ago by 43k • written 21 days ago by ★ 2.5k
0
votes
0
replies
196
views
News: Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo Individual-Based-Models Agent-Based-Models
updated 21 days ago by 43k • written 21 days ago by ★ 2.5k
0
votes
0
replies
195
views
News: Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop RNA-seq nextflow DNA-seq
updated 23 days ago by 43k • written 23 days ago by 11k
0
votes
0
replies
160
views
News: Deadline Approaching: PETs for Public Health Challenge
privacy public-health-challenge
updated 24 days ago by 43k • written 24 days ago by ▴ 380
0
votes
0
replies
194
views
News: Online course: Network Analysis in R
NetworkAnalyis R
25 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
200
views
News: Online course: Meta-analysis in R
Meta-Analysis R
updated 27 days ago by 43k • written 28 days ago by ★ 2.5k
1
vote
0
replies
145
views
News: Online Live Course: Introduction to Machine Learning in R
Rstats TScourses Rlang Rproject
updated 28 days ago by 43k • written 28 days ago by ▴ 70
2
votes
0
replies
139
views
News: Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM Rlang Rstats Rproject
updated 28 days ago by 43k • written 28 days ago by ▴ 70
2
votes
0
replies
139
views
News: Online Course Introduction to Network Analysis and Modelling
Python Network-Analysis
updated 28 days ago by 43k • written 28 days ago by ▴ 70
2
votes
0
replies
127
views
News: Course Functional Programming with R
Rstats TScourses Rproject KeepLearning Rlang
29 days ago by Transmitting Science communication ▴ 70
12
votes
2
replies
491
views
News: 8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop RNA-Seq DNA-Seq Illumina
29 days ago by David Langenberger 11k
2
votes
0
replies
136
views
News: Online course: Genome Annotation
Genome-Assembly RNA-seq Genome-Annotation
updated 29 days ago by 43k • written 29 days ago by ★ 2.5k
0
votes
0
replies
135
views
News: Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics vegan R
updated 4 weeks ago by 43k • written 4 weeks ago by ★ 2.5k
1
vote
0
replies
191
views
News: Landscape Genomics course in Switzerland
LFMM Landscape-Genomics Sambada R Local-Adaptation
7 days ago by carlopecoraro2 ★ 2.5k
8
votes
2
replies
825
views
News: FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell sequencing
4 weeks ago by David Langenberger 11k
0
votes
0
replies
162
views
News: Online course: Food Traceability Using Genomic Tools
Nanopore Genomic-Tools Illumina Food-Traceability
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
0
votes
0
replies
161
views
News: Online course: Eukaryotic Metabarcoding
Metabarcoding Biodiversity R eDNA
5 weeks ago by carlopecoraro2 ★ 2.5k
3
votes
2
replies
621
views
News: Announcement: Research Topic "Mechanistic, Machine Learning and Hybrid Models of the 'Other' Endocrine Regulatory Systems in Health and Disease", Vol…
mathematical-modelling endocrinology ML systems-biology machine-learning
5 weeks ago by Johannes W. Dietrich • 0
0
votes
0
replies
221
views
News: Online course: Reproducibility in Bioinformatics
Singularity Version-Control Docker Containers
updated 5 weeks ago by 43k • written 6 weeks ago by ★ 2.5k
0
votes
0
replies
185
views
News: Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic Bacterial-Genomics Pangenomics
updated 5 weeks ago by 43k • written 6 weeks ago by ★ 2.5k
0
votes
0
replies
184
views
News: Online course: Introduction to GWAS
GWAS Imputation StatisticalPower
6 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
175
views
News: Online course: Adaptation Genomics
StructuralVariants Selection AdaptationGenomics PopulationStructure
7 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
166
views
News: Online course: Analysis of Prokaryotic Pangenomes
BacterialGenomics Pangenomics
7 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
247
views
News: Online course on Genome Assembly and Annotation (1 seat left)
Galaxy GenomeAssembly GenomeAnnotation
7 weeks ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
186
views
News: NCBI's ClinVar now accepting somatic variation data
variation NCBI somatic-variants ClinVar
8 weeks ago by PeterC_NCBI ▴ 410
1
vote
1
reply
287
views
News: EMBL Course Hands-on course for sample preparation and data analysis in proteomics
EMBLProteomics
updated 8 weeks ago by • 0 • written 3 months ago by ▴ 10
1
vote
0
replies
214
views
News: Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
nextflow pipeline workshop
8 weeks ago by David Langenberger 11k
0
votes
0
replies
167
views
News: Online course: Genome Assembly and Annotation - 3 seats left
Genome-Assembly Galaxy Genome-Annotation
updated 8 weeks ago by 43k • written 8 weeks ago by ★ 2.5k
0
votes
0
replies
171
views
News: Call for abstract: Quest for Orthologs meeting in Montreal
conference phylogeny comparativegenomics orthology evolution
8 weeks ago by sina.majidian ▴ 20
1
vote
0
replies
172
views
News: shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability terminal bash
9 weeks ago by David Langenberger 11k
1
vote
1
reply
216
views
News: Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser IGB
updated 9 weeks ago by 43k • written 9 weeks ago by • 0
897 results • Page 1 of 18
Recent Votes
course on Landscape Genomics at the EPFL in Lausanne (June 17-21)
course on Landscape Genomics at the EPFL in Lausanne (June 17-21)
cellranger error message
Comment: Spike-in control found in raw reads (16S amplicon seq) but not picked up by DADA
Network plot from expression data in R using igraph
Comment: RNA seq analysis
RNA seq analysis
Recent Locations • All
France/Nantes/Institut du Thorax - INSERM UMR1087, 2 minutes ago
UCLA, 4 minutes ago
USA, 5 minutes ago
Italy, 5 minutes ago
United States, 7 minutes ago
Oviedo, 10 minutes ago
india, 10 minutes ago
Recent Awards • All
Commentator to andres.firrincieli 3.6k
Scholar to tim.booth ▴ 50
Popular Question to strive • 0
Popular Question to LauferVA 4.2k
Popular Question to ManuelDB ▴ 80
Popular Question to nkls063408 • 0
Popular Question to rj.rezwan • 0
Recent Replies
Comment: Different output for read length by Pierre Lindenbaum 161k
the first read as a length of 1747, i wonder how you can just find '50' $ wget -qO - "https://gist.githubusercontent.com/Macdot3/4650…
Comment: Problem with Seurat package in PercentageFeatureSet function by bk11 ★ 2.4k
Yes, `CreateAssayObject` function is used for only expression matrix.
Comment: Different output for read length by marco.barr ▴ 100
Here is my result, I hope you can see it. [https://gist.github.com/Macdot3/4650243a10540d8c06f728ffc16a136c][1] [1]: https://gist.gith…
Comment: Different output for read length by marco.barr ▴ 100
I just published my link on paste, why can't I see my public paste on the site?
Comment: cellranger error message by Max • 0
I'm having a similar issue. The sample_id matches the filename prefix before _S1_L001, but I get the error: Log message: Requested sample(s…
Comment: Different output for read length by marco.barr ▴ 100
Thanks so much GenoMax, I'm sharing the link as you told me
Comment: Different output for read length by GenoMax 142k
Post the data at pastebin.com and add a link here or you could a GitHub gist. You were suspended by biostars SPAM bot since you pasted link…
Comment: Different output for read length by GenoMax 142k
Post the data at pastebin.com and add the link here. You were suspended by biostars SPAM bot since you pasted these links in quick successi…
Comment: RNA seq analysis by s.ghazala • 0
Could you clarify on what exactly you are referring to with "SRA data table". If you are retrieving fastq files (raw data), then you could …
Comment: Spike-in control found in raw reads (16S amplicon seq) but not picked up by DADA by sovrappensiero ▴ 100
Thanks, Chris. I really appreciate your help. This has clarified a lot for me!
Answer: Snakemake fails to find conda in PBS by tim.booth ▴ 50
Snakemake does not have support for micromamba. There is an open issue: https://github.com/snakemake/snakemake/issues/2322
Comment: absolute path for symbolic links in Snakefile by tim.booth ▴ 50
Further to this answer - if you are using GNU coreutils (ie. any modern Linux), there is a "-r" flag to fix this problem. I typically use "…
Answer: Different output for read length by Pierre Lindenbaum 161k
I supect your reads are hard clipped. Show us the first lines of samtools view /home/sorted.bam | cut -f 2,6,10 | head -n 20
Comment: Presence of unknown sites in ANNOVAR output file by sainavyav22 • 0
Here you go. 1.perl convert2annovar.pl -format vcf4old 1008_Tumor.vcf > 1008Tumor_variant.avinput 2.perl annotate_variation.pl 100…
Comment: Filtering Multi-sample VCF file for all except one Genotype by Jeremy Leipzig 22k
Those are samples. If a sample has a 0/1 or a 1/1 genotype for that variant, they have the variant. Your question is ambiguous because you…
Traffic: 2565 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6