Converting IGV to Figure using Illustrator (or other tools)

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6 months ago

Daniel ▴ 30

Hello,

I am trying to use Illustrator to edit a saved IGV picture (in SVG format). Frustratingly, IGV's saved SVG is very complicated and contains many layers and data making it difficult to edit. Has anyone experienced this and has a work-around/ can recommend another tool/technique to get the same kind of visualization? (Basically, I am trying to show what the IGV tracks already show, albeit without more of the unnecessary things).

Thank you :)

Illustrator IGV • 806 views

ADD COMMENT • link written 6 months ago by Daniel ▴ 30

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I wrote BAM2SVG, http://lindenb.github.io/jvarkit/BamToSVG.html , the svg should be smaller.

ADD REPLY • link 6 months ago by Pierre Lindenbaum 161k

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Thanks. Do you have example photos? The links in the gallery are no longer working.

ADD REPLY • link 6 months ago by Daniel ▴ 30

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I just tested, the link https://twitter.com/yokofakun/status/522415314425090048 , it works.

ADD REPLY • link 6 months ago by Pierre Lindenbaum 161k

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Not for me, it says there's a typo. Could you paste a screenshot?

ADD REPLY • link 6 months ago by Daniel ▴ 30

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