Error in make STAR

Question

[huynhthienphai]

Hi everyone,

I installed STAR on Debian12 (VirtualBox). I have a problem when running the make command. The output is like this

$ make 
g++ -c   -O3 -std=c++11 -fopenmp -D'COMPILATION_TIME_PLACE="2023-08-25T17:42:59+01:00 :/home/huynhtp/software/STAR/source"' -D'GIT_BRANCH_COMMIT_DIFF="On branch master ; commit 79affaae7d5e70221287762eab4e40679fad87f7 ; diff files: "' -pipe -Wall -Wextra STAR.cpp
STAR.cpp: In function ‘void usage(int)’:
STAR.cpp:52:45: error: ‘parametersDefault’ was not declared in this scope
   52 |         cout.write(reinterpret_cast<char *>(parametersDefault),
      |                                             ^~~~~~~~~~~~~~~~~


STAR.cpp:53:20: error: ‘parametersDefault_len’ was not declared in this scope
   53 |                    parametersDefault_len);
      |                    ^~~~~~~~~~~~~~~~~~~~~

[GenoMax]

Save yourself the trouble and use pre-compiled binaries from https://github.com/alexdobin/STAR/tree/master/bin and/or use conda to install.

[Ram]

Please stop using the how-to tag - it's for how-to tutorials, not questions where you wish to know how to do something. Every question on the platform wants to know how to do a task, so it's not a relevant tag on questions.