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Recent Replies
Comment: anRichment is missing
by
Tatyana
•
0
Unfortunately, there are only tutorials and codes for tutorials for WGCNA, not installation files for any their packages... :(
Comment: anRichment is missing
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GenoMax
142k
See this link for the WGCNA documentation and code from Peter Langfelder : https://bioinformatics.stackexchange.com/questions/21885/where-t…
Comment: anRichment is missing
by
Tatyana
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The problem is back, Horwath's lab web is down again. Is it possible to get anRichment istallation file somewhere? (The greater problem is …
Comment: 16S rRNA microbiome differential abundance analysis with DESeq2 finds same micro
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1. Maribaculaceae is a family not a genus
2. Who said that ASV with the same taxonomic classification must have the same behaviour?
3. With…
Comment: Question regarding WGCNA
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andres.firrincieli
3.6k
the within-group variability is so small that these look like technical replicates rather than independent biological replicates
Answer: Gene ontology and homologs
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No. Homology is defined as shared common ancestry.
Two genes that take part in the same biological process may not have the same functio…
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I quickly googled [the source code of that function][1], and the error is triggered by this condition:
if(length(wn) < 1 || !is.whol…
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Thanks for the explanation.
I noticed and corrected a typo in which "*read* reverse strand" initially read as "*mate* reverse strand" in t…
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It's a commercial product, a *Staphylococcus hominis* genome. This species is not found in the DADA2 results, so I guess DADA2 is not ident…
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Plots are incomplete without legends. Please share the complete plot with mappings for shape and color.
Comment: Quetion regarding WGCNA
by
deepak
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Thank you for your reply andres.firrincieli. I have attached the PCA plot of the expression data used in the WGCNA.
version 2.3.6
version 2.3.6