3
votes
6
replies
2.0k
views
7 follow
5
votes
13
replies
2.0k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
updated 29 days ago by
ATpoint
82k
•
written 4 weeks ago by
BioinfGuru
★
1.7k
2
votes
6
replies
1.9k
views
6
votes
6
replies
1.8k
views
2
votes
2
replies
1.8k
views
updated 15 days ago by
e.r.zakiev
▴
210
•
written 3.9 years ago by
n.anuragsharma
▴
40
6
votes
5
replies
1.7k
views
4 days ago by
Arton
▴
10
1
vote
2
replies
1.7k
views
4
votes
15
replies
1.7k
views
updated 15 days ago by
Gordon Smyth
★
7.2k
•
written 5 months ago by
raplayer
▴
10
0
votes
9
replies
1.5k
views
1
vote
6
replies
1.4k
views
updated 11 hours ago by
scideas
▴
30
•
written 8 months ago by
rohitsatyam102
▴
870
2
votes
7
replies
1.4k
views
6 follow
updated 20 days ago by
Gordon Smyth
★
7.2k
•
written 8 months ago by
Calum
▴
10
3
votes
8
replies
1.4k
views
1
vote
2
replies
1.3k
views
4
votes
6
replies
1.2k
views
8
votes
16
replies
1.2k
views
1
vote
2
replies
1.2k
views
14 days ago by
Zhenyu Zhang
★
1.2k
1
vote
4
replies
1.1k
views
3
votes
0
replies
1.1k
views
14 days ago by
Ibrahim Tanyalcin
★
1.2k
1
vote
10
replies
1.1k
views
24 days ago by
DKA
▴
40
2
votes
9
replies
1.0k
views
2 hours ago by
LauferVA
4.2k
2
votes
11
replies
1.0k
views
updated 20 days ago by
jkbonfield
★
1.2k
•
written 4 weeks ago by
me
•
0
2
votes
3
replies
1000
views
13
votes
14
replies
978
views
updated 11 days ago by
t.montserrat.ayuso
▴
40
•
written 20 days ago by
carolofharvest
▴
40
1
vote
8
replies
961
views
updated 24 days ago by
Pierre Lindenbaum
161k
•
written 4 weeks ago by
Maria
•
0
7
votes
16
replies
961
views
20 days ago by
Ruqaiya
•
0
2
votes
5
replies
958
views
2
votes
9
replies
944
views
1
vote
10
replies
901
views
updated 13 days ago by
antonio.spl
•
0
•
written 4 months ago by
microorganism_001
▴
30
4
votes
11
replies
898
views
0
votes
2
replies
868
views
2
votes
3
replies
854
views
updated 15 days ago by
vjanve
•
0
•
written 7 months ago by
mateomejias
•
0
10
votes
14
replies
813
views
6 follow
updated 12 days ago by
GenoMax
142k
•
written 18 days ago by
nicole.kavanagh
•
0
4
votes
6
replies
811
views
7 follow
updated 22 days ago by
dsull
★
6.0k
•
written 26 days ago by
qudrat.nii
▴
10
0
votes
1
reply
806
views
1
vote
3
replies
803
views
updated 2 days ago by
sansan_96
▴
90
•
written 2.7 years ago by
boymin2020
▴
80
1
vote
5
replies
800
views
written 6 months ago by
Daniel
▴
30
2
votes
5
replies
792
views
0
votes
1
reply
787
views
4
votes
8
replies
774
views
0
votes
3
replies
773
views
8
votes
8
replies
768
views
3
votes
6
replies
763
views
3
votes
4
replies
762
views
3
votes
3
replies
757
views
27 days ago by
david.b.rombaut
▴
10
0
votes
2
replies
756
views
updated 16 days ago by
clairechung112
•
0
•
written 24 months ago by
amahdi779
•
0
1
vote
6
replies
753
views
updated 12 days ago by
GenoMax
142k
•
written 6 months ago by
michael.flower.14
▴
180
1
vote
16
replies
738
views
updated 1 day ago by
GenoMax
142k
•
written 4 days ago by
hophuquy0944
•
0
2
votes
9
replies
729
views
updated 4 days ago by
Pierre Lindenbaum
161k
•
written 12 days ago by
schmince
•
0
5
votes
4
replies
726
views
25 days ago by
kirillkirilenko
▴
40
Recent Votes
Recent Locations •
All
Russia, just now
United States, just now
Italy, just now
Poland, 2 minutes ago
Finland, 7 minutes ago
Brazil, 8 minutes ago
San Francisco, 9 minutes ago
Recent Awards •
All
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Popular Question to
syedahamdani94
•
0
Popular Question to
mohammadhassanj
▴
260
Recent Replies
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot give a precise answer, as ML is not my field, but generally, why don't you apply the method to pseudobulks of the exact single-cel…
Answer: geom_bar issue in ggplot2 with xlim()
by
ATpoint
82k
https://stackoverflow.com/questions/10365167/geom-bar-bars-not-displaying-when-specifying-ylim
Comment: What marks a De-Novo Genome assembly as FAILED?
by
Umer
▴
50
Yes. We are sequencing 45 different samples with illumina.
12 of these are also going to be sequenced with Nanopore (for hybrid assembly). …
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
LauferVA
4.2k
how has this code progressed? is it publically available? would you want to work together?
Comment: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
•
0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴
130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
ATpoint
82k
Use everything before the whitespace in list.txt, for example `A00869:294:HCW57DSXY:2:1101:3929:1000` and not `A00869:294:HCW57DSXY:2:1101:…
Answer: CellRanger output more cells than specified using --force-cells? Why?
by
scideas
▴
30
I actually had this same issue with CellRanger v7- turns out that since you have 2 species in your mapping reference, CellRanger is forcing…
Answer: Checking chromosome builds for genotyping data
by
Muhammad
•
0
Assume you have genotype data in Plink format. (G.bed, G.bim, G.fam)
Download some reference panel data in Plink format (R.bed, R.bim, R.f…
Comment: Error in CIBERSORTx ($ operator is invalid for atomic vectors)
by
nguyenn6
•
0
did you ever figure it out? i'm having the same issue.
Comment: Traveler with Infernal mapping failed
by
anton.i.petrov
•
0
Hi Larissa! I am the lead developer of R2DT and I've just noticed this question. Could you please email help@r2dt.bio with your input seque…
Comment: constructing pangenome through psvcp
by
analyst
▴
50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Comment: calculating genomic coverage/ base overlap in R
by
1769mkc
★
1.2k
you can `dput(head(df)` for the both the data frame so that other can test for possible solutions
Traffic: 1375 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6