6
votes
4
replies
13k
views
9
votes
23
replies
9.8k
views
4 days ago by
vytarasov
▴
180
9
votes
7
replies
7.2k
views
updated 4 days ago by
Ruqaiya
•
0
•
written 5.7 years ago by
xiaozhongzhiping
▴
20
2
votes
4
replies
5.6k
views
updated 2 days ago by
Thind amarinder
▴
340
•
written 4.9 years ago by
garbuzov
▴
70
4
votes
12
replies
4.9k
views
10 follow
9
votes
13
replies
4.8k
views
updated 5 days ago by
analyst
▴
50
•
written 6.4 years ago by
David_emir
▴
490
0
votes
4
replies
3.6k
views
updated 1 day ago by
Fungal genetics
•
0
•
written 7.1 years ago by
ntyagi654
•
0
4
votes
4
replies
2.9k
views
2
votes
14
replies
2.9k
views
6 follow
updated 1 day ago by
Anitha
•
0
•
written 4.8 years ago by
ww22runner
▴
60
4
votes
3
replies
2.9k
views
updated 6 days ago by
Pierre Lindenbaum
161k
•
written 6 days ago by
Lila M
★
1.2k
6
votes
5
replies
2.3k
views
0
votes
4
replies
2.3k
views
updated 23 hours ago by
Ram
43k
•
written 13 months ago by
mohyeddine.taleb
•
0
0
votes
6
replies
2.1k
views
1
vote
6
replies
1.8k
views
5
votes
5
replies
1.7k
views
15 hours ago by
Arton
•
0
1
vote
2
replies
1.7k
views
1
vote
2
replies
1.3k
views
1
vote
5
replies
726
views
0
votes
3
replies
688
views
2
votes
9
replies
678
views
updated 12 hours ago by
Pierre Lindenbaum
161k
•
written 8 days ago by
schmince
•
0
0
votes
9
replies
567
views
0
votes
3
replies
556
views
2
votes
5
replies
552
views
1
vote
7
replies
526
views
6 days ago by
deepak
•
0
0
votes
11
replies
520
views
3 days ago by
Tuck898
•
0
0
votes
1
reply
513
views
updated 2 days ago by
aw7
▴
300
•
written 25 days ago by
abhishekghadge
•
0
1
vote
4
replies
497
views
3
votes
6
replies
479
views
2
votes
5
replies
475
views
4
votes
7
replies
462
views
1
vote
1
reply
448
views
1
vote
2
replies
438
views
6 days ago by
Zeng Hao
▴
40
0
votes
8
replies
438
views
6 days ago by
marco.barr
▴
110
3
votes
3
replies
435
views
0
votes
2
replies
419
views
1
vote
3
replies
419
views
0
votes
7
replies
409
views
updated 2 days ago by
Mohamed Abderrahmane
▴
20
•
written 16 days ago by
matteo.levorato
•
0
1
vote
4
replies
404
views
updated 5 days ago by
GenoMax
142k
•
written 28 days ago by
aniigodwinn
•
0
0
votes
6
replies
399
views
2
votes
5
replies
397
views
4
votes
7
replies
389
views
1 day ago by
Chen
•
0
0
votes
4
replies
381
views
1
vote
9
replies
380
views
updated 5 days ago by
i.sudbery
19k
•
written 8 days ago by
Assa Yeroslaviz
★
1.8k
6
votes
7
replies
367
views
3 days ago by
sansan_96
▴
90
1
vote
7
replies
364
views
16 hours ago by
ntsopoul
▴
60
0
votes
1
reply
362
views
2
votes
6
replies
360
views
updated 14 hours ago by
a.alnawfal.1992
▴
260
•
written 2 days ago by
Vahid
•
0
2
votes
8
replies
348
views
updated 3 days ago by
Pierre Lindenbaum
161k
•
written 3 days ago by
Matteo Ungaro
▴
100
1
vote
2
replies
347
views
updated 2 days ago by
Ram
43k
•
written 3 days ago by
t.fortunato.asquini
•
0
0
votes
3
replies
344
views
Recent Votes
Recent Locations •
All
United States, just now
Canada, 2 minutes ago
Estonia, 2 minutes ago
UK, 6 minutes ago
United Kingdom, 7 minutes ago
United States, 8 minutes ago
Taiwan, 10 minutes ago
Recent Awards •
All
Popular Question to
Chironex
▴
40
Scholar to
rpolicastro
13k
Popular Question to
Amr
▴
160
Popular Question to
asalimih
▴
60
Popular Question to
nd48
▴
20
Recent Replies
Answer: How can you *consistently* download BioProject IDs from NCBI's BioSample databas
by
Ash
•
0
I know this was asked several years ago, but finding this post helped me solve my own problem and in the process I solved this one too.
…
Answer: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
swbarnes2
14k
Would Parkinson's be expected to have an effect on blood cells? Neurons, sure, but blood cells?
Comment: Doubt about the process of annotation, detection, identification and classificat
by
MarcosCosta
•
0
Thank you very much, you've helped me a lot
Comment: Filtering VCF files based on VAF giving incorrect results
by
Arton
•
0
Thank you. I can't try a completely new tool but I will keep your command for future use. Do you think my commands were correct? For exampl…
Comment: Genotyping sites with N in reference genome
by
Zhenyu Zhang
★
1.2k
Whether N -> A/T/G/C represents a variant is heavily dependent on the tool itself, and I know most tools don't. Since you don't see it in y…
Comment: calculating genomic coverage/ base overlap in R
by
marco.barr
▴
110
The code seems correct at first glance... How did you generate the data in the Excel file? Have you checked the exon annotations? You could…
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Did you remeber to unzip/untar the `nt` preformatted files that you downloaded?
Comment: Genotyping sites with N in reference genome
by
shpak.max
▴
50
Just to clarify, I have set additional sites in the reference genome to 'N', which means (based on your statement) that these will not be g…
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
Pierre Lindenbaum
161k
see https://www.biostars.org/p/9496674/
<!-- when i runed blastn(version 2.15) and nt database(latest version). I used aspera to download…
Answer: Genotyping sites with N in reference genome
by
Pierre Lindenbaum
161k
> Does UnifiedGenotyper skip/ignore sites where the reference genotype is N
yes. The variant is in YOUR data, not in the reference where '…
Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
by
yura.grabovska
▴
70
Do you have samples that should in theory have a good degree over overlap in terms of cell types across the two sequencing types?
I would …
Comment: Wrong ZYGOSITY by ensembl vep on DeepVariant vcf file
by
asalimih
▴
60
I found out that vep is only checking the GT field therefore assigning HOM to the Zygosity. Therefore the problem should be from deepvarian…
Comment: Add stats to boxplot in R
by
Lélé
▴
10
To remove "Kruskall Wallis" you can try adding the argument label="p" or label = "p.signif" which displays the p-value or *** like this:
…
Answer: Sequencing Depth (Read Depth) Calculations
by
GenoMax
142k
You could also use `pandepth` ([**LINK**][1]) or `mosdepth` ([**LINK**][2]) as well. These will allow you to be flexible about windowed cov…
Traffic: 2903 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6