updated 16 hours ago by
bkleiboeker
▴
370
•
written 2.7 years ago by
carov
•
0
0
votes
1
reply
729
views
0
votes
1
reply
521
views
0
votes
6
replies
390
views
10 hours ago by
kl
▴
10
0
votes
5
replies
302
views
1
vote
2
replies
250
views
1
vote
3
replies
233
views
updated 15 hours ago by
ATpoint
82k
•
written 1 day ago by
jagdish7921
•
0
2
votes
2
replies
220
views
23 hours ago by
michelafrancesconi9
▴
20
1
vote
6
replies
206
views
updated 20 minutes ago by
shenwei356
8.4k
•
written 16 hours ago by
nicole.kavanagh
•
0
0
votes
1
reply
204
views
updated 4 hours ago by
Scooter
▴
280
•
written 6 days ago by
avocado123
•
0
1
vote
2
replies
186
views
3 hours ago by
rianna.collins
•
0
0
votes
1
reply
162
views
0
votes
1
reply
154
views
updated 15 hours ago by
Adam
▴
30
•
written 1 day ago by
Ahiad Chen Zion
•
0
0
votes
1
reply
132
views
0
votes
1
reply
120
views
0
votes
1
reply
90
views
updated 15 hours ago by
Ram
43k
•
written 17 hours ago by
ernestine.kubi
•
0
1
vote
2
replies
75
views
updated 1 hour ago by
ATpoint
82k
•
written 7 hours ago by
poordumbsillyidiot
•
0
0
votes
0
replies
69
views
0
votes
0
replies
60
views
0
votes
0
replies
46
views
0
votes
1
reply
38
views
0
votes
0
replies
29
views
5 hours ago by
James
▴
10
0
votes
0
replies
26
views
0
votes
0
replies
25
views
1
vote
0
replies
9
views
21 minutes ago by
marco.barr
▴
90
0
votes
0
replies
8
views
Recent Votes
Recent Locations •
All
Brazil, 2 minutes ago
Spain, 2 minutes ago
Belgium, 2 minutes ago
Italy, 2 minutes ago
Potsdam, Germay, 3 minutes ago
China, 3 minutes ago
Germany, 3 minutes ago
Recent Awards •
All
Popular Question to
Jeol
▴
20
Popular Question to
lefthandgergo
▴
10
Popular Question to
mgranada3
▴
30
Popular Question to
maryak
▴
20
Popular Question to
nicole.kavanagh
•
0
Popular Question to
elcortegano
▴
200
Recent Replies
Comment: Bacterial plasmid analysis
by
shenwei356
8.4k
My colleague has an unpublished tool for plasmid analysis (clustering), and it has really good results. You might have a try.
https://githu…
Comment: Odd alignment question/finding
by
ATpoint
82k
bwa mem is not fully deterministic, see from the developer: https://www.biostars.org/p/238628/#238817
Comment: How to perform single cell multimodal integration using Seurat for Geo datasets
by
ATpoint
82k
It's funny that you ask because the paper that these data were used for is called `Integrated analysis of multimodal single-cell data` from…
Comment: Odd alignment question/finding
by
liorglic
★
1.4k
I can't come up with an explanation, but two things you can try for debugging are: 1) look at the fastp stats - do they add up and make sen…
Answer: Bacterial plasmid analysis
by
Mensur Dlakic
★
27k
If you put all your sequences in separate files but in the same directory, this program will build a cladogram based on average nucleotide …
Comment: POSSUM not working due to incompatible pssm file
by
rianna.collins
•
0
Thank you so much. I'm new to this and didn't realise there was a code option.
Answer: Is there a way to increase the automatic label text size in Cytoscape?
by
Scooter
▴
280
Greetings,
Are you saying that you can't use the size setting in the style tab? That should certainly work, as should the label size se…
Answer: Basic stats in hierfstat
by
mdav
•
0
Hi Zoe, did you find an answer for this? I am also getting the same error.
Comment: GATK won't produce figures while analyzing covariates to generate 'recal_plots.p
by
GenoMax
141k
Your cluster may be missing libraries etc to create the PDF plots (this looks like a cluster job submission) on your cluster. Did you check…
Comment: Post-imputation plot
by
kl
▴
10
Ok yes I think my thought was that given these errors, I could remove the mismatches and flip the alleles which seem to need flipping based…
Comment: Bacterial plasmid analysis
by
nicole.kavanagh
•
0
I think I will perhaps use their predominant PlasmidFinder type to group plasmids together and create separate core phylogenies for each as…
Comment: Bacterial plasmid analysis
by
GenoMax
141k
Can you classify the plasmids based on function (resistance genes they are carrying or some other criteria). Sizes above are indicating a w…
Comment: DESeq2 processing problems
by
ATpoint
82k
Initially posted here https://support.bioconductor.org/p/9158036/ where I suggested to put code and data and noted that GEOquery returns ar…
Answer: Post-imputation plot
by
LChart
3.9k
I agree that some need to be flipped (A/T and C/G where your panel frequency is 1 - ref panel frequency). There are other variants which yo…
Comment: RNA editing sites based on DNA seq and RNA seq
by
Adam
▴
30
Are those 20% unaligned reads coming after hyper-editing detection?
Traffic: 2300 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6