0
votes
2
replies
183
views
0
votes
1
reply
206
views
updated 2 days ago by
Chris Dean
▴
390
•
written 2 days ago by
sovrappensiero
▴
90
1
vote
2
replies
226
views
2
votes
7
replies
366
views
updated 4 hours ago by
Zhenyu Zhang
★
1.2k
•
written 2 days ago by
Qroid
▴
40
0
votes
1
reply
507
views
0
votes
1
reply
144
views
updated 2 days ago by
Mensur Dlakic
★
27k
•
written 2 days ago by
Arun Sai Kumar
•
0
1
vote
1
reply
159
views
1
vote
1
reply
165
views
updated 2 days ago by
jared.andrews07
★
16k
•
written 3 days ago by
Oburah
•
0
0
votes
6
replies
276
views
5
votes
5
replies
256
views
updated 2 days ago by
atharvakarkare14
▴
30
•
written 3 days ago by
Begonia_pavonina
▴
150
1
vote
7
replies
431
views
3
votes
3
replies
300
views
0
votes
0
replies
96
views
0
votes
0
replies
101
views
updated 2 days ago by
Ram
43k
•
written 3 days ago by
carlopecoraro2
★
2.5k
0
votes
1
reply
217
views
0
votes
0
replies
130
views
1
vote
1
reply
135
views
updated 2 days ago by
Ram
43k
•
written 3 days ago by
marco.barr
▴
90
0
votes
0
replies
84
views
0
votes
0
replies
95
views
9
votes
10
replies
480
views
6 follow
updated 2 days ago by
Zamin Iqbal
▴
20
•
written 3 days ago by
nicole.kavanagh
•
0
0
votes
1
reply
274
views
updated 3 days ago by
Scooter
▴
280
•
written 9 days ago by
avocado123
•
0
0
votes
0
replies
96
views
3 days ago by
James
▴
10
0
votes
1
reply
584
views
1
vote
3
replies
223
views
updated 2 days ago by
barslmn
★
2.1k
•
written 3 days ago by
poordumbsillyidiot
•
0
0
votes
1
reply
203
views
0
votes
0
replies
95
views
0
votes
0
replies
124
views
0
votes
7
replies
530
views
0
votes
1
reply
217
views
1
vote
3
replies
302
views
updated 3 days ago by
ATpoint
82k
•
written 4 days ago by
jagdish7921
•
0
0
votes
1
reply
777
views
0
votes
1
reply
144
views
updated 3 days ago by
Ram
43k
•
written 3 days ago by
ernestine.kubi
•
0
0
votes
0
replies
105
views
1
vote
2
replies
245
views
3 days ago by
rianna.collins
•
0
0
votes
1
reply
181
views
0
votes
0
replies
142
views
0
votes
1
reply
637
views
updated 4 days ago by
Ram
43k
•
written 4 days ago by
Dr Huma Naz
•
0
2
votes
2
replies
269
views
4 days ago by
michelafrancesconi9
▴
20
0
votes
5
replies
367
views
5
votes
6
replies
519
views
1
vote
1
reply
231
views
updated 4 days ago by
Ram
43k
•
written 4 days ago by
Jonathan Yoou
▴
60
1
vote
2
replies
285
views
1
vote
3
replies
278
views
0
votes
2
replies
227
views
0
votes
0
replies
162
views
0
votes
1
reply
180
views
updated 3 days ago by
Adam
▴
30
•
written 4 days ago by
Ahiad Chen Zion
•
0
1
vote
5
replies
320
views
2 days ago by
Riccardo
▴
10
0
votes
0
replies
129
views
0
votes
0
replies
127
views
updated 4 days ago by
Ram
43k
•
written 4 days ago by
carlopecoraro2
★
2.5k
0
votes
0
replies
125
views
updated 4 days ago by
Ram
43k
•
written 5 days ago by
Alexandros
•
0
Recent Locations •
All
Belgium, 2 minutes ago
United Kingdom, 3 minutes ago
Spain, 4 minutes ago
Armenia, 6 minutes ago
Bangladesh, 13 minutes ago
Istanbul, Turkey, 14 minutes ago
Saudi Arabia, 15 minutes ago
Recent Awards •
All
Popular Question to
Assa Yeroslaviz
★
1.8k
Popular Question to
Yoosef
▴
60
Popular Question to
Zhenyu Zhang
★
1.2k
Popular Question to
psm
▴
130
Popular Question to
Medhat
9.7k
Autobiographer to
Mathew
▴
30
Commentator to
dsull
★
6.0k
Recent Replies
Comment: The GDC Legacy Archive is retiring soon.
by
Zhenyu Zhang
★
1.2k
If you are talking about methylation idat files, they were all migrated from legacy to the data portal.
If you are talking about other pl…
Comment: How to access TCGA samples that were treated with a specific drug?
by
Zhenyu Zhang
★
1.2k
These TCGA samples were taken 10 ~ 20 years ago, and there is no way they have been treated by the modern immunotherapy.
Are you sure tha…
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1))
It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴
10
Hi Mathew,
The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴
30
Hi,
I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴
30
Hi,
You asked three questions so I will attempt to help the best I can
**What should be the optimal GC score cutoff**
It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴
40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
•
0
I ran into same issue of "duplicated gene symbol(s)":
1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, :
22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴
10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★
27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
•
0
Hey @Ruqaiya!
Can you please give more details on why smalt is opted here?
According to what I can see, the tool has become obsolete! Why …
Traffic: 1271 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6