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Comment: Comment: How to plot VDJ clonotyping data in UMAP of Seurat object using Immunarch
10 months ago by Ming Tommy Tang ★ 3.9k
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1.1k
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Comment: Comment: interpreting results from pathway analysis
10 months ago by Ming Tommy Tang ★ 3.9k
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1.2k
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Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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568
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Comment: Comment: Make rownames more legible in R Heatmap
10 months ago by Ming Tommy Tang ★ 3.9k
2
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488
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Tutorial: Understanding Hierarchical Clustering in R, Distance Measures, and Linkage Methods
clustering gene-expression rstats
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
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1
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873
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Answer: Answer: scRNA-seq subclustering
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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769
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Comment: Comment: How to interpret RNAseq output?
10 months ago by Ming Tommy Tang ★ 3.9k
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594
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Comment: Comment: change gene id to gene name
10 months ago by Ming Tommy Tang ★ 3.9k
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1.1k
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Comment: Comment: After R studio update, restrict view of columns in dataframe.
10 months ago by Ming Tommy Tang ★ 3.9k
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1
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1.0k
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Answer: Answer: clustering changes in complex heatmap everytime
10 months ago by Ming Tommy Tang ★ 3.9k
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1.9k
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Comment: Comment: SRA-toolkit installation: "fastq-dump not found"
10 months ago by Ming Tommy Tang ★ 3.9k
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1
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692
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Comment: Comment: how to tell if the JackStrawPlot is good
10 months ago by Ming Tommy Tang ★ 3.9k
2
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1
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1.1k
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Comment: Comment: After R studio update, restrict view of columns in dataframe.
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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2.6k
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Comment: Comment: SEACR and MACS2
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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1.2k
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Comment: Comment: Is there any way to access gnomAD data from R?
10 months ago by Ming Tommy Tang ★ 3.9k
1
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1
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692
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Comment: Comment: how to tell if the JackStrawPlot is good
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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468
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Answer: Answer: ANNOVAR Annotation of multiple VCF files error because of the absence of hg38_gn
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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1.0k
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Comment: Comment: GSEA documentation
10 months ago by Ming Tommy Tang ★ 3.9k
4
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0
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792
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Tutorial: How to do GSEA in R for RNAseq data
gsea RNAseq rstats
10 months ago by Ming Tommy Tang ★ 3.9k
5
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1
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5.7k
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Answer: Answer: Convert Human to Mouse Symbols
10 months ago by Ming Tommy Tang ★ 3.9k
0
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0
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809
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Comment: Comment: complex heatmap
10 months ago by Ming Tommy Tang ★ 3.9k
1
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1
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1.8k
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Comment: Comment: How to add VDJ clonotyping data to Seurat object of scRNA-seq
10 months ago by Ming Tommy Tang ★ 3.9k
1
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1
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1.8k
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Answer: Answer: How to add VDJ clonotyping data to Seurat object of scRNA-seq
10 months ago by Ming Tommy Tang ★ 3.9k
0
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0
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609
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Comment: Comment: GSEA vs Functional Annotation
10 months ago by Ming Tommy Tang ★ 3.9k
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0
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697
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Tutorial: How to read all files into a single dataframe (merge all RNAseq count table)
RNA-seq rstats
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
1
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0
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416
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Answer: Answer: How to remove batch effect from TCGA RNA-seq data?
10 months ago by Ming Tommy Tang ★ 3.9k
1
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1
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1.0k
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Comment: Comment: Annotation of spatial data
10 months ago by Ming Tommy Tang ★ 3.9k
1
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0
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1.1k
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Comment: Comment: Seurat: Log fold change and p value when control expression is 0
10 months ago by Ming Tommy Tang ★ 3.9k
1
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0
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1.0k
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Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
0
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1
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1.0k
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Answer: Answer: Annotation of spatial data
10 months ago by Ming Tommy Tang ★ 3.9k
2
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1
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2.9k
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Comment: Comment: Merge really large amount of Seurat objects
updated 10 months ago by 142k • written 10 months ago by ★ 3.9k
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0
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881
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Comment: Comment: complex heatmap with CPM
10 months ago by Ming Tommy Tang ★ 3.9k
0
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1
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1.0k
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Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
0
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1
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1.0k
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Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
0
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0
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902
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Comment: Comment: How to ask computational biology questions
10 months ago by Ming Tommy Tang ★ 3.9k
0
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0
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1.0k
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Comment: Comment: Reads in IGV are mostly in intron regions
10 months ago by Ming Tommy Tang ★ 3.9k
1
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2
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902
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Tutorial: How to ask computational biology questions
computational-biology
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
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0
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1.6k
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Comment: Comment: Calculating Average Coverage or Read Depth for a Sequence (WES)
10 months ago by Ming Tommy Tang ★ 3.9k
0
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1
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1.7k
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Comment: Comment: bar chart to show a p value of 0
10 months ago by Ming Tommy Tang ★ 3.9k
1
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0
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700
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Tutorial: How to pre-process scRNAseq data from fastq to count matrix with two lines of code
unix scRNA-seq single-cell rstats
updated 10 months ago by 43k • written 10 months ago by ★ 3.9k
1
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0
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839
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Comment: Comment: How to interpret chipseq profile plot
11 months ago by Ming Tommy Tang ★ 3.9k
0
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1
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839
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Answer: Answer: How to interpret chipseq profile plot
11 months ago by Ming Tommy Tang ★ 3.9k
3
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0
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759
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Tutorial: best practices for single-cell RNAseq analysis
cell single scRNAseq
11 months ago by Ming Tommy Tang ★ 3.9k
1
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0
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621
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Tutorial: How to make a perfect heatmap using RNAseq data
heatmap RNAseq rstats
11 months ago by Ming Tommy Tang ★ 3.9k
4
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0
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968
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Tutorial: How to make a heatmap in R and deep understand it
heatmap r
12 months ago by Ming Tommy Tang ★ 3.9k
0
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1
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1.9k
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Comment: Comment: Align miRNA library (small RNA-seq) without trimming
13 months ago by Ming Tommy Tang ★ 3.9k
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0
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1.6k
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Answer: Answer: Adding median value to VlnPlot in Seurat
13 months ago by Ming Tommy Tang ★ 3.9k
0
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0
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1.9k
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Answer: Answer: how to know what adapter sequences to trim for RNA-seq?
13 months ago by Ming Tommy Tang ★ 3.9k
0
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0
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1.4k
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Answer: Answer: Variant Calling with Multiple Individuals in Freebayes
13 months ago by Ming Tommy Tang ★ 3.9k
0
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2
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1.8k
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Answer: Answer: Log2 FC Threshold
13 months ago by Ming Tommy Tang ★ 3.9k
424 results • Page 2 of 9
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