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Showing :
comments
0
votes
0
replies
4.2k
views
Comment:
C: using hclust object from FactoMineR::HCPC to force clustering in pheatmap
3.8 years ago by
komal.rathi
★ 4.1k
1
vote
0
replies
2.9k
views
Comment:
C: Are there publicly available metagenomic RNA-Seq datasets?
updated 4.4 years ago by
Ram
44k • written 9.9 years ago by
komal.rathi
★ 4.1k
1
vote
1
reply
7.4k
views
Comment:
C: Genomic Features - makeTranscriptDbFromGFF()
updated 4.4 years ago by
Ram
44k • written 9.9 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
7.4k
views
Comment:
C: Genomic Features - makeTranscriptDbFromGFF()
updated 4.4 years ago by
Ram
44k • written 9.9 years ago by
komal.rathi
★ 4.1k
0
votes
2
replies
6.7k
views
Comment:
C: FastQC and EstimateLibrarySize (Picard): Library Complexity and/or Duplicated Re
updated 4.4 years ago by
Ram
44k • written 10.0 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
9.7k
views
Comment:
C: Download all eQTL data for all the 9 tissues from GTEx Portal
updated 4.4 years ago by
Ram
44k • written 10.0 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
7.4k
views
Comment:
C: How does DESeq2 handle the read-counts assigned to special counters in HTSeq-cou
updated 4.4 years ago by
Ram
44k • written 10.1 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
6.3k
views
Comment:
C: DESeq and Limma+Voom Normalization for Rna-Seq Data Using Ercc Spike-In
updated 4.5 years ago by
Ram
44k • written 8.5 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
6.3k
views
Comment:
C: DESeq and Limma+Voom Normalization for Rna-Seq Data Using Ercc Spike-In
updated 4.5 years ago by
Ram
44k • written 8.5 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
32k
views
Comment:
C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.5 years ago by
Ram
44k • written 8.6 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
8.5k
views
Comment:
C: snakemake: pipeline failed with MissingOutputException
4.5 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
12k
views
Comment:
C: gtf file for htseq count
updated 4.6 years ago by
Ram
44k • written 9.5 years ago by
komal.rathi
★ 4.1k
1
vote
0
replies
5.7k
views
Comment:
C: 23andme: Convert Human Assembly Build 36 to Build 37
updated 4.6 years ago by
Ram
44k • written 9.5 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
6.1k
views
Comment:
C: HTSeq count (reverse count with paired-end data)
updated 4.6 years ago by
Ram
44k • written 9.9 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
32k
views
Comment:
C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by
Ram
44k • written 10.2 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
32k
views
Comment:
C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by
Ram
44k • written 10.2 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
32k
views
Comment:
C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by
Ram
44k • written 10.2 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
32k
views
Comment:
C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by
Ram
44k • written 10.2 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
4.0k
views
Comment:
C: Count The Number Of A, T, G And C At Specific Genomic Locations For Multiple Rna
updated 4.6 years ago by
Ram
44k • written 10.2 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
9.7k
views
Comment:
C: Download all eQTL data for all the 9 tissues from GTEx Portal
4.6 years ago by
komal.rathi
★ 4.1k
1
vote
0
replies
4.5k
views
Comment:
C: How to get known canonical transcript information from UCSC for a specific genco
5.0 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
5.9k
views
Comment:
C: GATK ASEReadCounter: Downstream analysis for identifying allele specific express
5.4 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
4.2k
views
Comment:
C: RSEM output interpretation
5.6 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
1.6k
views
Comment:
C: How to determine RNA-seq samples from dbGaP metadata
5.8 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.5k
views
Comment:
C: Why does GFF prepared using dexseq_prepare_annotation shows different exon numbe
6.7 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
4.4k
views
Comment:
C: exon level quantification using htseq count
6.7 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.2k
views
Comment:
C: Filter bam files using a bed file: Why is the mate missing?
6.7 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
4.4k
views
Comment:
C: exon level quantification using htseq count
6.7 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
4.4k
views
Comment:
C: exon level quantification using htseq count
6.7 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
8.7k
views
Comment:
C: htseq-count cannot find pysam
6.8 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
4.8k
views
Comment:
C: How do I obtain germline mutation for TCGA samples?
6.8 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
3.1k
views
Comment:
C: IGV color interpretation by insert size
6.8 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
3.1k
views
Comment:
C: IGV color interpretation by insert size
6.8 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
2.9k
views
Comment:
C: Detection of fusion events of Retrotransposons and genes/lncRNA from RNA-seq dat
6.9 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
3.3k
views
Comment:
C: How to create an AffyBatch object using a data matrix?
7.2 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
1.9k
views
Comment:
C: RNASeq differential expression: How to deal with few genes with extremely high e
7.2 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.0k
views
Comment:
C: Is it possible/recommended to trim RNA-Seq reads to a specific length
7.2 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.0k
views
Comment:
C: Is it possible/recommended to trim RNA-Seq reads to a specific length
7.2 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
96k
views
Comment:
C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.4 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
2.9k
views
Comment:
C: Visualizing hg19 and hg38 FPKMs in a single plot
7.5 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
2.9k
views
Comment:
C: Visualizing hg19 and hg38 FPKMs in a single plot
7.5 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.1k
views
Comment:
C: TARGET Pediatric Cancer Code Table
7.6 years ago by
komal.rathi
★ 4.1k
1
vote
0
replies
3.7k
views
Comment:
C: changing gtf file manually
7.7 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.6k
views
Comment:
C: Convert specific regions in bam file to vcf and annotating the vcf
7.8 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.6k
views
Comment:
C: Convert specific regions in bam file to vcf and annotating the vcf
7.8 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
2.3k
views
Comment:
C: Identify genes with extracellular matrix domains
7.9 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
2.3k
views
Comment:
C: Identify genes with extracellular matrix domains
7.9 years ago by
komal.rathi
★ 4.1k
0
votes
1
reply
2.3k
views
Comment:
C: Identify genes that have domains sticking out in the extracellular matrix
7.9 years ago by
komal.rathi
★ 4.1k
0
votes
0
replies
8.4k
views
Comment:
C: Affymetrix probeset IDs...
7.9 years ago by
komal.rathi
★ 4.1k
1
vote
0
replies
2.9k
views
Comment:
C: HTSeq result, most genes have 0 count?
8.0 years ago by
komal.rathi
★ 4.1k
277 results • Page
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