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Comment: Comment: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
12 days ago by Medhat 9.7k
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990
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Comment: Comment: guppy basecaller giving error while basecalling
10 months ago by Medhat 9.7k
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632
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Comment: Comment: More Efficient: Whole Genome VCF splitting with and without tbi file
11 months ago by Medhat 9.7k
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1
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710
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Answer: Answer: Need help editing text in the shell
11 months ago by Medhat 9.7k
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1.2k
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Comment: Comment: What are your preferred programs for processing DNA long reads? (de novo assembl
11 months ago by Medhat 9.7k
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1
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1.2k
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Comment: Comment: Why some insertions are symbolic in ALT column?
11 months ago by Medhat 9.7k
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1.5k
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Comment: Comment: Problem with GPU guppy_basecaller and SLURM
11 months ago by Medhat 9.7k
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1.5k
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Comment: Comment: Problem with GPU guppy_basecaller and SLURM
11 months ago by Medhat 9.7k
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704
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Comment: Comment: Variant calling analysis
11 months ago by Medhat 9.7k
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1
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704
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Comment: Comment: Variant calling analysis
11 months ago by Medhat 9.7k
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544
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Comment: Comment: Do we have any disease specific SNVs database?
14 months ago by Medhat 9.7k
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5.1k
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Comment: Comment: conda create env using .yml file leads to dependency conflicts
14 months ago by Medhat 9.7k
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1
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1.6k
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Comment: Comment: GATK showing error of reference file index
14 months ago by Medhat 9.7k
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534
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Comment: Comment: Methods for downsampling coverage in a VCF
15 months ago by Medhat 9.7k
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1
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925
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Comment: Comment: I have a reference genome explained by accession number instead of chromosome nu
15 months ago by Medhat 9.7k
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2
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2.5k
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Comment: Comment: SV calling using giraffe/vg
16 months ago by Medhat 9.7k
4
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761
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Comment: Comment: BIOINFORMATICS
16 months ago by Medhat 9.7k
2
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878
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Comment: Comment: Looking for tools to individuate gene-gene correlations from a few candidates
16 months ago by Medhat 9.7k
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978
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Comment: Comment: No CR tag in the sam file mapped by STARsolo (10x v3.1 data)
16 months ago by Medhat 9.7k
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1.7k
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Comment: Comment: Different results in finding human sequences from metagenomes (bowtie2 and Krake
17 months ago by Medhat 9.7k
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1.2k
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Comment: Comment: bedtools intersect multiple files using for loop
17 months ago by Medhat 9.7k
1
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1
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1.2k
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Comment: Comment: bedtools intersect multiple files using for loop
17 months ago by Medhat 9.7k
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0
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910
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Comment: Comment: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Cen
18 months ago by Medhat 9.7k
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1
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910
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Job: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Center, Houston, United States
NGS TGS
updated 11 months ago by 43k • written 22 months ago by 9.7k
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1.3k
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Comment: Comment: Introducing Cramino: a *fast* QC tool for long reads
18 months ago by Medhat 9.7k
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1
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955
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Comment: Comment: For loop RNA Sequencing alignment
19 months ago by Medhat 9.7k
2
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1.2k
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Comment: Comment: sorting multiple .bam files in linux cluster
20 months ago by Medhat 9.7k
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0
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1.0k
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Comment: Comment: gosling.js and React 1.7+
20 months ago by Medhat 9.7k
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1
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1.0k
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Comment: Comment: gosling.js and React 1.7+
20 months ago by Medhat 9.7k
1
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1
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1.1k
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Comment: Comment: Leaky RNA
20 months ago by Medhat 9.7k
0
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0
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925
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Comment: Comment: Staff Scientist - Bioinformatician, Baylor College of Medicine, Human Genome Seq
21 months ago by Medhat 9.7k
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1
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1.3k
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Comment: Comment: Biopython Code to Convert DNA FASTA file to Protein FASTA file
22 months ago by Medhat 9.7k
0
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0
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841
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Comment: Comment: getting the coordinates of mapped regions from a bam file
22 months ago by Medhat 9.7k
1
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1.3k
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Comment: Comment: Programming languages in industry
22 months ago by Medhat 9.7k
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0
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1.3k
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Comment: Comment: Programming languages in industry
22 months ago by Medhat 9.7k
2
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1
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1.3k
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Answer: Answer: Programming languages in industry
22 months ago by Medhat 9.7k
0
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1
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925
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Job: Staff Scientist - Bioinformatician, Baylor College of Medicine, Human Genome Sequencing Center, Houston, United States
NGS TGS
updated 11 months ago by 43k • written 22 months ago by 9.7k
4
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3
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3.0k
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Split VCF file
vcf sequencing
written 7.3 years ago by 9.7k
0
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0
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958
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Comment: Comment: Source of soft clipped reads from target sequencing
23 months ago by Medhat 9.7k
1
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0
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1.6k
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Answer: Answer: VCF Statistics
24 months ago by Medhat 9.7k
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1
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587
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Comment: Comment: Align chimpanzee genome
2.0 years ago by Medhat 9.7k
2
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2
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2.7k
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Answer: Answer: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
2.0 years ago by Medhat 9.7k
0
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0
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1.0k
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Job: Postdoctoral Fellow Pacific Northwest Research Institute (PNRI) in Seattle
variants NGS
updated 22 months ago by 43k • written 2.0 years ago by 9.7k
1
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0
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774
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Comment: Comment: How to generate a bam file with reads of only a certain length?
2.0 years ago by Medhat 9.7k
1
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1
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774
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Comment: Comment: How to generate a bam file with reads of only a certain length?
2.0 years ago by Medhat 9.7k
0
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0
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730
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Comment: Comment: how to visulize structure variants
2.0 years ago by Medhat 9.7k
2
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1
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730
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Answer: Answer: how to visulize structure variants
2.0 years ago by Medhat 9.7k
1
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2
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4.7k
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Using PRINSEQ lite with zipped paired-end illumina reads
prinseq next-gen-sequencing quality-reads Illumina
updated 2.1 years ago by • 0 • written 9.7 years ago by 9.7k
0
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0
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969
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Comment: Comment: liftOver input file
2.2 years ago by Medhat 9.7k
0
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0
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1.7k
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Comment: Comment: How to extract reads that support the structural variants using the vcf file and
2.3 years ago by Medhat 9.7k
1,008 results • Page 1 of 21
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