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16k
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Answer: Answer: Issues installing bcl2fastq?
10 weeks ago by predeus ★ 2.0k
1
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0
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667
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Answer: Answer: API way to find "Original submitter" files in SRA?
12 weeks ago by predeus ★ 2.0k
0
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0
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1.7k
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Answer: Answer: Get original format information from SRA metadata
3 months ago by predeus ★ 2.0k
0
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0
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975
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Answer: Answer: SRA obtained metagenomic reads appears to corrupt - cannot work on SingleM
9 months ago by predeus ★ 2.0k
2
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0
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678
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Answer: Answer: How can I figure out where a mouse (C57BL/6J) genome is heterozygous?
9 months ago by predeus ★ 2.0k
0
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1
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663
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Answer: Answer: snRNA seq analysis - huge computational demand due to large number of entries
9 months ago by predeus ★ 2.0k
0
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0
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3.4k
views
Answer: Answer: HISAT2 relaxing parameters?
13 months ago by predeus ★ 2.0k
2
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0
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1.3k
views
Answer: Answer: Read counting in RSEM and Salmon (alignment mode)
13 months ago by predeus ★ 2.0k
0
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1
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3.2k
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Answer: Answer: SCTransform and differential gene expression
21 months ago by predeus ★ 2.0k
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0
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2.0k
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Answer: Answer: Issues with Quantification with STARsolo
2.3 years ago by predeus ★ 2.0k
3
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1
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2.8k
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Answer: Answer: RNA velocity for smart-seq2 dataset
2.4 years ago by predeus ★ 2.0k
1
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1
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1.6k
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Answer: Answer: sugestion nanopore assembly and illumina reads
2.9 years ago by predeus ★ 2.0k
1
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0
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2.1k
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Answer: Answer: single cell sequencing data doublets removal tools selection
3.1 years ago by predeus ★ 2.0k
3
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1
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1.1k
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Answer: A: TSS predator input files
3.2 years ago by predeus ★ 2.0k
1
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1
reply
882
views
Answer: A: Telomere sequence in ncbi human genome assembly?
3.2 years ago by predeus ★ 2.0k
0
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1
reply
2.9k
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Answer: A: Want to reverse the fasta sequence
3.2 years ago by predeus ★ 2.0k
0
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1
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2.8k
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Answer: A: GEOquery loading error.
3.2 years ago by predeus ★ 2.0k
0
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1
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6.5k
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Answer: A: GEO datasets-Single cell RNAseq analysis using seurat
3.2 years ago by predeus ★ 2.0k
2
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1
reply
4.3k
views
Answer: A: RNA-seq ribosomal genes vs proteins
3.2 years ago by predeus ★ 2.0k
3
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1
reply
1.7k
views
Answer: A: Suggest common programming tasks for biologists who are novice programmers
3.2 years ago by predeus ★ 2.0k
0
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1
reply
773
views
Answer: A: Searching for human genotyping data thats not public
3.3 years ago by predeus ★ 2.0k
1
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1
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951
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Answer: A: Best Practices for chi-seq analysis
3.3 years ago by predeus ★ 2.0k
0
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0
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3.7k
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Answer: A: Algorithm to remove batch effects
3.3 years ago by predeus ★ 2.0k
0
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1
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1.7k
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Answer: A: Which aligner for human WGS
3.3 years ago by predeus ★ 2.0k
3
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0
replies
1.1k
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Answer: A: interprating PCA plot
3.3 years ago by predeus ★ 2.0k
1
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0
replies
533
views
Answer: A: RNA Seq: Outlier gene counts
3.3 years ago by predeus ★ 2.0k
0
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0
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2.5k
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Answer: A: Tools for scRNAseq
3.3 years ago by predeus ★ 2.0k
1
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0
replies
4.1k
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Answer: A: How to get input for provean from vcf files annotated by snpeff?
3.5 years ago by predeus ★ 2.0k
1
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1
reply
4.2k
views
Answer: A: Heatmap from the RNAseq raw count data
3.9 years ago by predeus ★ 2.0k
0
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1
reply
1.2k
views
Answer: A: How can I fix frameshift errors in assembled genome?
4.2 years ago by predeus ★ 2.0k
4
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2
replies
9.2k
views
Answer: A: Too late to switch to Bioinformatics?
updated 4.4 years ago by 43k • written 9.9 years ago by ★ 2.0k
1
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1
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4.6k
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Answer: A: Use esearch/efetch to output relationship table of GSM to SRR (bascially SRA fil
updated 4.4 years ago by 43k • written 10.0 years ago by ★ 2.0k
0
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1
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3.8k
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Answer: A: Tools for metagenomics classification using long reads
4.4 years ago by predeus ★ 2.0k
0
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0
replies
1.6k
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Answer: A: Trinity RSEM Bowtie2 align_and_estimate_abundance script error
4.7 years ago by predeus ★ 2.0k
2
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1
reply
2.7k
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Answer: A: Sequence duplication levels in de-novo assemblies
4.7 years ago by predeus ★ 2.0k
0
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2
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1.7k
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Answer: A: Principal Component Analysis PCA
4.7 years ago by predeus ★ 2.0k
1
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0
replies
3.1k
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Answer: A: Best strategy to get GO terms for a proteome?
4.7 years ago by predeus ★ 2.0k
0
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0
replies
3.7k
views
Answer: A: RepeatMasker on new species
4.8 years ago by predeus ★ 2.0k
4
votes
2
replies
8.1k
views
Answer: A: samtools markdup vs PICARD's MarkDuplicates when removing duplicated reads
4.8 years ago by predeus ★ 2.0k
1
vote
0
replies
1.1k
views
Answer: A: Is there some good software to align/compare fasta sequences in my PC
4.8 years ago by predeus ★ 2.0k
0
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0
replies
828
views
Answer: A: Looking for the best plot for overlapping features
4.8 years ago by predeus ★ 2.0k
4
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0
replies
6.6k
views
Answer: A: How to circularize genome assemblies
4.9 years ago by predeus ★ 2.0k
1
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0
replies
1.7k
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Answer: A: When will the HG 19/ GRC37 finally become obsolete
5.0 years ago by predeus ★ 2.0k
1
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0
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5.5k
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Answer: A: which matrix should be used to draw heatmap in RNAseq?
5.0 years ago by predeus ★ 2.0k
0
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0
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1.1k
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Answer: A: Number of genes in a kegg pathway
5.0 years ago by predeus ★ 2.0k
2
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0
replies
3.3k
views
Answer: A: Is computing TPM from read count from DEseq2 count matrix necessary?
5.0 years ago by predeus ★ 2.0k
1
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0
replies
3.8k
views
Answer: A: Hybrid assembly using MinION data + correction with Illumina. Which strategy to
5.0 years ago by predeus ★ 2.0k
0
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1
reply
1.3k
views
Answer: A: Interpretation of several pairwise overlaps
5.0 years ago by predeus ★ 2.0k
5
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1
reply
7.1k
views
Answer: A: Batch effect correction
5.0 years ago by predeus ★ 2.0k
2
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0
replies
2.2k
views
Answer: A: plasmid recovery from hybrid assembly
5.0 years ago by predeus ★ 2.0k
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