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Generating genesets matched for GC content and length
next-gen dna RNA-Seq dna-seq
updated 3.9 years ago by ▴ 30 • written 3.9 years ago by ▴ 50
1
vote
4
replies
2.4k
views
TPM for correlation between genes
rnaseq
updated 3.9 years ago by ▴ 30 • written 3.9 years ago by ▴ 50
0
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1
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2.4k
views
Comment: C: TPM for correlation between genes
3.9 years ago by gradstudentNew ▴ 50
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2
replies
1.1k
views
PCA with split up chromosomes
PCA GWAS
4.0 years ago by gradstudentNew ▴ 50
0
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1
reply
957
views
Comment: C: RNAseq cell line as a covariate
4.2 years ago by gradstudentNew ▴ 50
2
votes
3
replies
957
views
RNAseq cell line as a covariate
rnaseq deseq2 cellline transcriptome
updated 4.2 years ago by 88k • written 4.2 years ago by ▴ 50
0
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1
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3.1k
views
Comment: C: Effect Allele Frequency in base summary statistics for PRSs calculation
4.3 years ago by gradstudentNew ▴ 50
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0
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608
views
Meta-analyzing DESeq2 output
rnaseq deseq2
4.3 years ago by gradstudentNew ▴ 50
0
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0
replies
755
views
Comment: C: DESeq2 counts (inverse relationship)
4.3 years ago by gradstudentNew ▴ 50
0
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1
reply
755
views
Comment: C: DESeq2 counts (inverse relationship)
4.3 years ago by gradstudentNew ▴ 50
0
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6
replies
755
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DESeq2 counts (inverse relationship)
RNA-Seq counts
updated 4.3 years ago by 100k • written 4.3 years ago by ▴ 50
0
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0
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982
views
Comment: C: Complex DESeq2 Model with different gene dosages
4.3 years ago by gradstudentNew ▴ 50
0
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0
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982
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Comment: C: Complex DESeq2 Model with different gene dosages
4.3 years ago by gradstudentNew ▴ 50
2
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4
replies
982
views
Complex DESeq2 Model with different gene dosages
DESeq2 RNAseq Statistics Genes
4.3 years ago by gradstudentNew ▴ 50
11
votes
9
replies
8.2k
views
Extracting certain columns from VCF file
vcf genotype vcftools exome
updated 14 months ago by 43k • written 6.0 years ago by ▴ 50
0
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1
reply
1.2k
views
Complicated Multi-factor Differential Expression
RNAseq Multifactor Differential Expression Sleuth
updated 5.4 years ago by 8.2k • written 5.4 years ago by ▴ 50
3
votes
2
replies
3.9k
views
Keeping both A1/A2 in PLINK for assoc/logistic output
PLINK GWAS
updated 5.8 years ago by 10k • written 5.8 years ago by ▴ 50
0
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1
reply
1.8k
views
Best way to impute GWAS summary statistics
GWAS Summary Statistics imputation genotyping
5.9 years ago by gradstudentNew ▴ 50
1
vote
4
replies
7.3k
views
Extracting genotypes and filtering from a VCF file containing multiple exomes of families
DNA-seq genotype filter vcf exome
updated 6.0 years ago by 161k • written 6.0 years ago by ▴ 50
0
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1
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7.3k
views
Comment: A: Extracting genotypes and filtering from a VCF file containing multiple exomes of
6.0 years ago by gradstudentNew ▴ 50
1
vote
1
reply
8.2k
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Comment: C: Extracting certain columns from VCF file
6.0 years ago by gradstudentNew ▴ 50
0
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1
reply
8.2k
views
Comment: C: Extracting certain columns from VCF file
updated 6.0 years ago by 142k • written 6.0 years ago by ▴ 50
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