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0
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Expand the dna sequence downstreama and upstream of the sequence for motif analysis
Exon RNA-Seq DEXSeq Motif
19 months ago by osiemen ▴ 30
0
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2
replies
875
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Use biomart getSequence to obtain cDNA sequence based on exon coordinates obtained from DEXSeq
Biomart Exon RNA-Seq DEXSeq
updated 19 months ago by ★ 1.8k • written 19 months ago by ▴ 30
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0
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303
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Identification of tissue-specific exons using DEXSeq
DEXSeq Exon RNA-Seq Expression Count
20 months ago by osiemen ▴ 30
1
vote
7
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1.2k
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Executing a python script parallel for mutiple files in directory
DEXSeq RNA-Seq bash parallel
updated 21 months ago by 3.2k • written 21 months ago by ▴ 30
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3
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944
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Merging 2 SRR runs of the same sample?
SRA Sample RNA-Seq SRX SRR
updated 21 months ago by 82k • written 21 months ago by ▴ 30
1
vote
5
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929
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Collecting samples from different studies for RNASeq analysis.
Mouse-data Brain Retina RNA-Seq Sample-collection
updated 21 months ago by 19k • written 21 months ago by ▴ 30
3
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4
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1.2k
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DEXSeq Error loading in data set - subscript out of bound
DEXSeq Exon RNA-Seq Expression Count
updated 17 months ago by • 0 • written 21 months ago by ▴ 30
6
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9
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1.6k
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DEXSeq - No Exon Counts
DEXSeq Exon RNA-Seq Expression Count
21 months ago by osiemen ▴ 30
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2
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1.1k
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Reasons for switching from Affymetrix HGU133Plus 2.0 array platform to HGU133Plus+PM
micro-array genome Affymetrix
6.1 years ago by osiemen ▴ 30
0
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1
reply
1.1k
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how to make "custom" affy batch vector (affymetrix plus2)
R software error
6.2 years ago by osiemen ▴ 30
0
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1
reply
2.0k
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Getting information about samples(.CEL files) from GEO using R
micro-array R
updated 6.2 years ago by 88k • written 6.2 years ago by ▴ 30
2
votes
11
replies
3.6k
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Downloading multiple samples with GEO accesion numbers
microarray GEO
6.3 years ago by osiemen ▴ 30
4
votes
7
replies
3.6k
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Average size and amount of Enhancer and Promoters ?
genome DNA
updated 6.4 years ago by ★ 4.0k • written 6.4 years ago by ▴ 30
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2
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1.9k
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Bed tools for comparing files and calculating the percentage of different parts
bed bedtools percentage
6.4 years ago by osiemen ▴ 30
2
votes
2
replies
2.0k
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Which Enhancer regulates which gene
next-gen SNP TAD Enhancer gene
updated 6.5 years ago by ★ 1.7k • written 6.5 years ago by ▴ 30
2
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3
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2.0k
views
Known databases for pathogenic SNV's in the non coding regions
next-gen genome snp
6.5 years ago by osiemen ▴ 30
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