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Comment: Comment: conda create env using .yml file leads to dependency conflicts
14 months ago by cfos4698 ★ 1.1k
1
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2
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5.1k
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Answer: Answer: conda create env using .yml file leads to dependency conflicts
14 months ago by cfos4698 ★ 1.1k
1
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0
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1.3k
views
Comment: Comment: Split trio vcf file
15 months ago by cfos4698 ★ 1.1k
0
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1
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1.3k
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Answer: Answer: Split trio vcf file
15 months ago by cfos4698 ★ 1.1k
4
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1
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2.6k
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Answer: Answer: bcftools isec output for multiple vcf files interpretations
15 months ago by cfos4698 ★ 1.1k
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0
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639
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Answer: Answer: Issues with clusterProfiler and WikiPathways
15 months ago by cfos4698 ★ 1.1k
0
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1
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1.9k
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Comment: Comment: PROKKA.gff file is not compatible with featureCounts
15 months ago by cfos4698 ★ 1.1k
1
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0
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1.2k
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Answer: Answer: command line - how to change name of multiple files at the same time
15 months ago by cfos4698 ★ 1.1k
0
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0
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495
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Answer: Answer: Extract species-specific SNPs from VCF files
15 months ago by cfos4698 ★ 1.1k
1
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0
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1.5k
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Comment: Comment: Issues With Using Singularity In Order To Run Software "quested access to the re
15 months ago by cfos4698 ★ 1.1k
1
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0
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1.7k
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Comment: Comment: Error in reference fasta file when indexing with samtools
15 months ago by cfos4698 ★ 1.1k
2
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1
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1.7k
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Comment: Comment: Error in reference fasta file when indexing with samtools
16 months ago by cfos4698 ★ 1.1k
0
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0
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1.1k
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Comment: Comment: Not returning any alleles when using bcftools view -q
23 months ago by cfos4698 ★ 1.1k
0
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1
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1.1k
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Answer: Answer: Not returning any alleles when using bcftools view -q
23 months ago by cfos4698 ★ 1.1k
2
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1
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1.5k
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Answer: Answer: Errors loading in a treefile using ETE3
2.2 years ago by cfos4698 ★ 1.1k
0
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0
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1.3k
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Answer: Answer: How can I trim the primer and mask it with the original primer sequences?
2.3 years ago by cfos4698 ★ 1.1k
0
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0
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936
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Comment: Comment: Sickle is giving empty trimmed file
2.3 years ago by cfos4698 ★ 1.1k
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0
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733
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Answer: Answer: subset vcf to keep only samples heterozygous or homozygous for the alternate all
2.3 years ago by cfos4698 ★ 1.1k
2
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0
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970
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Answer: Answer: Which is the file containing genome assembly?
2.3 years ago by cfos4698 ★ 1.1k
0
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1
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859
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Comment: Comment: Running bigWigToWig using Anaconda in a Linux System
2.3 years ago by cfos4698 ★ 1.1k
1
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1
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1.2k
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Comment: Comment: Tools for pairwise sequence alignment
2.3 years ago by cfos4698 ★ 1.1k
0
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0
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1.9k
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Answer: Answer: Command-line alternative to Geneious assemble for Sanger sequencing data
2.4 years ago by cfos4698 ★ 1.1k
0
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1
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853
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Answer: Answer: SnpEff does not create htmlStats
2.4 years ago by cfos4698 ★ 1.1k
4
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0
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1.9k
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Answer: Answer: a question about using Enrichr
2.5 years ago by cfos4698 ★ 1.1k
0
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0
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754
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Answer: Answer: help with filtering sequences to make a phylogenetic tree
2.5 years ago by cfos4698 ★ 1.1k
0
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0
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770
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Comment: Comment: Age nodes in R
2.5 years ago by cfos4698 ★ 1.1k
0
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1
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2.9k
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Comment: Comment: Snakemake Megahit error
2.5 years ago by cfos4698 ★ 1.1k
0
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0
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7.0k
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Comment: Comment: MinKNOW (guppy) not having the permission to basecall or demultiplex from a diff
2.5 years ago by cfos4698 ★ 1.1k
1
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1
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2.2k
views
Comment: Comment: Functional profiling visualization enrichplot error: NAs introduced by coercion
2.5 years ago by cfos4698 ★ 1.1k
0
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1
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2.2k
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Comment: Comment: Functional profiling visualization enrichplot error: NAs introduced by coercion
2.5 years ago by cfos4698 ★ 1.1k
0
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0
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1.1k
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Comment: Comment: Spike protein sequences for COVID-19 variants
2.5 years ago by cfos4698 ★ 1.1k
2
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1
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1.1k
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Answer: Answer: Spike protein sequences for COVID-19 variants
2.5 years ago by cfos4698 ★ 1.1k
3
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1
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2.8k
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Answer: Answer: Bam file depth of coverage and statstics
2.5 years ago by cfos4698 ★ 1.1k
1
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1
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1.7k
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Comment: Comment: GO enrichment analysis with clusterProfiler
2.5 years ago by cfos4698 ★ 1.1k
1
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1
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1.7k
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Answer: Answer: GO enrichment analysis with clusterProfiler
2.5 years ago by cfos4698 ★ 1.1k
2
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1
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2.0k
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Answer: Answer: Noob: Help writing this shell for salmon quantification?
2.6 years ago by cfos4698 ★ 1.1k
1
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1
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2.1k
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Answer: Answer: kegg IDs to pathways in R
2.6 years ago by cfos4698 ★ 1.1k
0
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1
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1.9k
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Comment: Comment: How to run MLST with multiple fastq files
2.6 years ago by cfos4698 ★ 1.1k
0
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1
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1.9k
views
Comment: Comment: How to run MLST with multiple fastq files
2.6 years ago by cfos4698 ★ 1.1k
1
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1
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1.9k
views
Answer: Answer: How to run MLST with multiple fastq files
2.6 years ago by cfos4698 ★ 1.1k
0
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0
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1.3k
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Answer: Answer: Protein Sequences MSA vs. BLASTp
2.6 years ago by cfos4698 ★ 1.1k
0
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1
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3.0k
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Comment: Comment: Trimmomatic unknown trimmer
2.6 years ago by cfos4698 ★ 1.1k
0
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1
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3.0k
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Comment: Comment: Trimmomatic unknown trimmer
2.6 years ago by cfos4698 ★ 1.1k
0
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0
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4.9k
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Comment: Comment: conda error
2.6 years ago by cfos4698 ★ 1.1k
3
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0
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1.7k
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Answer: Answer: Large Scale SARS CoV 2 multiple Sequence Alignment
2.6 years ago by cfos4698 ★ 1.1k
2
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0
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1.3k
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Answer: Answer: How to Append numbers on ALL headers in FASTA (e.g., >gene#1)?
2.8 years ago by cfos4698 ★ 1.1k
2
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0
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1.6k
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Answer: Answer: convert GenBank formatted sequence file to FASTA format
2.8 years ago by cfos4698 ★ 1.1k
0
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0
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1.9k
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Comment: Comment: Using 'expand' in snakemake target rule with constraints
2.8 years ago by cfos4698 ★ 1.1k
3
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2
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1.9k
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Using 'expand' in snakemake target rule with constraints
snakemake glob_wildcards expand
2.8 years ago by cfos4698 ★ 1.1k
9
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6
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2.7k
views
Trouble running snakemake while defining maximum RAM usage
snakemake
updated 2.9 years ago by 14k • written 2.9 years ago by ★ 1.1k
118 results • Page 2 of 3
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