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Comment:
Comment: Calculating percentage of cells proliferating in single cell rna seq data
6 weeks ago by
Haci
▴ 690
0
votes
0
replies
272
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Comment:
Comment: merging Seurat objects after SCT
6 weeks ago by
Haci
▴ 690
1
vote
1
reply
664
views
Comment:
Comment: DESeq2 Multifactor Design
6 weeks ago by
Haci
▴ 690
0
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0
replies
664
views
Comment:
Comment: DESeq2 Multifactor Design
6 weeks ago by
Haci
▴ 690
2
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1
reply
664
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Comment:
Comment: DESeq2 Multifactor Design
6 weeks ago by
Haci
▴ 690
1
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0
replies
280
views
Comment:
Comment: RNA seq normalization and gene gene correlation
6 weeks ago by
Haci
▴ 690
2
votes
1
reply
333
views
Comment:
Comment: How to row normalize a matrixplot?
7 weeks ago by
Haci
▴ 690
1
vote
1
reply
324
views
Answer:
Answer: ComplexHeatmap with specific rownames
updated 7 weeks ago by
Ram
44k • written 7 weeks ago by
Haci
▴ 690
2
votes
0
replies
479
views
Answer:
Answer: Can anyone give me the code for in-silico digestion of whole genome with two res
7 weeks ago by
Haci
▴ 690
3
votes
1
reply
404
views
Answer:
Answer: kraken2 vs krakenuniq
updated 7 weeks ago by
Ram
44k • written 7 weeks ago by
Haci
▴ 690
1
vote
0
replies
313
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Comment:
Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
8 weeks ago by
Haci
▴ 690
0
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0
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344
views
Comment:
Comment: How to compare bulk RNA seq data demultiplexed in different ways?
8 weeks ago by
Haci
▴ 690
0
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0
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652
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Comment:
Comment: Installing Cell Ranger
8 weeks ago by
Haci
▴ 690
0
votes
0
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239
views
Comment:
Comment: Finding chimeric reads for CRISPR edited mouse cells from RNA-Seq data
8 weeks ago by
Haci
▴ 690
3
votes
0
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381
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Answer:
Answer: FDR and Bonferroni
9 weeks ago by
Haci
▴ 690
1
vote
0
replies
382
views
Comment:
Comment: how to convert SummarizedExperiment files to DESeqDataSet??
11 weeks ago by
Haci
▴ 690
0
votes
1
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382
views
Comment:
Comment: how to convert SummarizedExperiment files to DESeqDataSet??
11 weeks ago by
Haci
▴ 690
0
votes
1
reply
382
views
Comment:
Comment: how to convert SummarizedExperiment files to DESeqDataSet??
11 weeks ago by
Haci
▴ 690
0
votes
1
reply
377
views
Comment:
Comment: transcriptomic data for molecular subtyping
3 months ago by
Haci
▴ 690
0
votes
0
replies
655
views
Comment:
Comment: RNAseq analysis: how to add new gene into an existing worm based reference
4 months ago by
Haci
▴ 690
1
vote
1
reply
636
views
Comment:
Comment: plotCounts() error in R: indexing outside of limit
4 months ago by
Haci
▴ 690
1
vote
2
replies
636
views
Comment:
Comment: plotCounts() error in R: indexing outside of limit
4 months ago by
Haci
▴ 690
0
votes
0
replies
503
views
Comment:
Comment: Edit fasta header for TSA submission
7 months ago by
Haci
▴ 690
3
votes
1
reply
770
views
Answer:
Answer: Generate a fraction of immune cell between two condition from single cell RNAseq
8 months ago by
Haci
▴ 690
0
votes
1
reply
589
views
Comment:
Comment: What to do after importing quantification with tximport
9 months ago by
Haci
▴ 690
0
votes
0
replies
2.4k
views
Comment:
Comment: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by
Haci
▴ 690
0
votes
1
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2.4k
views
Answer:
Answer: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by
Haci
▴ 690
0
votes
1
reply
11k
views
Comment:
C: cellranger count help
3.9 years ago by
Haci
▴ 690
1
vote
1
reply
2.9k
views
Comment:
C: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
4.0 years ago by
Haci
▴ 690
2
votes
2
replies
1.0k
views
Answer:
C: Subsetting Genes from Clusters
4.1 years ago by
Haci
▴ 690
0
votes
0
replies
847
views
Answer:
A: Differential gene expression
4.1 years ago by
Haci
▴ 690
0
votes
0
replies
1.9k
views
Comment:
C: Seurat integrated analysis - methods for cell-type specific responses
4.1 years ago by
Haci
▴ 690
0
votes
0
replies
3.8k
views
Comment:
C: Legends in FeaturePlot of Seurat Package
4.1 years ago by
Haci
▴ 690
0
votes
1
reply
1.3k
views
Comment:
C: MUC5AC is not present in deseq2 results
4.2 years ago by
Haci
▴ 690
2
votes
1
reply
1.3k
views
Answer:
C: MUC5AC is not present in deseq2 results
4.2 years ago by
Haci
▴ 690
0
votes
1
reply
1.3k
views
Comment:
C: MUC5AC is not present in deseq2 results
4.2 years ago by
Haci
▴ 690
0
votes
0
replies
11k
views
Comment:
C: cellranger count help
4.2 years ago by
Haci
▴ 690
0
votes
2
replies
11k
views
Comment:
C: cellranger count help
4.2 years ago by
Haci
▴ 690
3
votes
1
reply
11k
views
Answer:
A: cellranger count help
4.2 years ago by
Haci
▴ 690
0
votes
0
replies
1.5k
views
Comment:
C: SCRNAseq vs qRT PCR
4.2 years ago by
Haci
▴ 690
4
votes
1
reply
8.7k
views
Comment:
C: removing overrepresented sequences from rna-seq
4.2 years ago by
Haci
▴ 690
0
votes
0
replies
1.2k
views
Comment:
C: sample-specific filtering of counts matrix
4.2 years ago by
Haci
▴ 690
1
vote
1
reply
4.8k
views
Comment:
C: how to unpack sra file?
4.2 years ago by
Haci
▴ 690
1
vote
0
replies
1.4k
views
Comment:
C: Bac-end mapping to a genome
4.2 years ago by
Haci
▴ 690
1
vote
1
reply
1.4k
views
Comment:
C: Bac-end mapping to a genome
4.2 years ago by
Haci
▴ 690
0
votes
1
reply
1.0k
views
Comment:
C: what can i do with R2 reads
4.2 years ago by
Haci
▴ 690
2
votes
1
reply
1.4k
views
Answer:
A: Bac-end mapping to a genome
4.2 years ago by
Haci
▴ 690
1
vote
0
replies
9.4k
views
Comment:
C: Seurat integration of two datasets - GSE126783
4.3 years ago by
Haci
▴ 690
3
votes
1
reply
9.4k
views
Answer:
C: Seurat integration of two datasets - GSE126783
4.3 years ago by
Haci
▴ 690
0
votes
0
replies
3.1k
views
Comment:
C: best way to combine RNAseq data from different sequencing batches
4.3 years ago by
Haci
▴ 690
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