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questions
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replies
347
views
Comparing the regulators and Pathways induced by Differential Expression Analysis of two treatments at the same time point
timepoints
Comparison
RNA-Seq
DE
treatments
21 months ago by
mkh
▴ 60
0
votes
2
replies
2.6k
views
Online alignment for large fasta files
genome
alignment
sequence
fasta
updated 3.6 years ago by
hugo.avila
▴ 490 • written 3.6 years ago by
mkh
▴ 60
0
votes
0
replies
662
views
gff3 format, modENCODE, score and ChIP-Seq
ChIP-Seq
bed
updated 14 months ago by
Ram
44k • written 4.0 years ago by
mkh
▴ 60
5
votes
5
replies
1.3k
views
RNAseq service recommendations
next-gen
rna-seq
updated 4.9 years ago by
maxwhjohn1988
▴ 130 • written 4.9 years ago by
mkh
▴ 60
1
vote
1
reply
950
views
Merge overlapped gene coordinates in bed file format
ChIP-Seq
updated 5.1 years ago by
Pierre Lindenbaum
161k • written 5.1 years ago by
mkh
▴ 60
3
votes
8
replies
1.2k
views
Specific Antibodies for ChiP-Seq assay
ChIP-Seq
5.1 years ago by
mkh
▴ 60
0
votes
0
replies
1.0k
views
A pipeline/software to analyse Drip-seq
next-gen
written 5.5 years ago by
mkh
▴ 60
0
votes
0
replies
777
views
How to study open promoters are correlated with high expression using MNase and RNA-seq data?
rna-seq
MNase
updated 5.6 years ago by
Biostar
20 • written 5.7 years ago by
mkh
▴ 60
2
votes
3
replies
4.1k
views
How to visualize Hi-C bed file format?
genome
Hi-C
5.7 years ago by
mkh
▴ 60
7
votes
6
replies
5.2k
views
PCA plot for TOP 500 genes + prcomp
RNA-Seq
5.8 years ago by
mkh
▴ 60
7
votes
8
replies
9.6k
views
How to get PCA3 and PCA4 from Deseq2?
RNA-seq
5.8 years ago by
mkh
▴ 60
3
votes
11
replies
2.0k
views
massive pairwise sequence alignment
alignment
sequence
updated 6.2 years ago by
Joe
21k • written 6.3 years ago by
mkh
▴ 60
0
votes
1
reply
1.1k
views
chipseq identified sequences
ChIP-Seq
updated 6.3 years ago by
Arup Ghosh
3.2k • written 6.4 years ago by
mkh
▴ 60
1
vote
1
reply
3.8k
views
Sringtie gff output has "STRG." instead of genid
Assembly
RNA-Seq
updated 6.3 years ago by
GenoMax
142k • written 6.3 years ago by
mkh
▴ 60
2
votes
3
replies
3.0k
views
FIMO: scan motif on a DNA sequence
alignment
genome
ChIP-Seq
statics
6.4 years ago by
mkh
▴ 60
1
vote
3
replies
1.2k
views
Split RNA-seq reads
RNA-Seq
updated 6.7 years ago by
Pierre Lindenbaum
161k • written 6.7 years ago by
mkh
▴ 60
0
votes
3
replies
3.1k
views
Difference Between Gene Expression And Transcript Expression
RNA-Seq
kallisto
6.8 years ago by
mkh
▴ 60
0
votes
1
reply
1.1k
views
metagenomic profiling and population analysis
RNA-Seq
next-gen
updated 7.1 years ago by
Zev.Kronenberg
12k • written 7.1 years ago by
mkh
▴ 60
18 results • Page
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