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3
votes
8
replies
2.2k
views
Can I ignore these MSTRG genes in downstream analysis (pantherdb.org)?
RNA-Seq deseq2 stringtie
updated 3.7 years ago by ★ 4.1k • written 5.1 years ago by ▴ 20
2
votes
11
replies
2.4k
views
ballgown has "." as Gene Names
ballgown RNA-Seq assembly
updated 4.2 years ago by ▴ 60 • written 5.4 years ago by ▴ 20
0
votes
0
replies
624
views
I am trying to get the promoters of a set of differentially expressed genes
ChIP-Seq RNA-Seq
4.5 years ago by Fawzi Yassine ▴ 20
2
votes
3
replies
949
views
Why is the pValue peaks very high in EpigenomeRoadMap data.
ChIP-Seq
updated 4.5 years ago by ★ 1.1k • written 4.5 years ago by ▴ 20
8
votes
4
replies
10k
views
correlations between principal components and known variables
next-gen rna-seq DEseq2
updated 4.6 years ago by ★ 4.1k • written 4.6 years ago by ▴ 20
1
vote
6
replies
1.8k
views
RNA-seq on data that has two runs per (two `sra` files) sample
RNA-Seq alignment
4.7 years ago by Fawzi Yassine ▴ 20
6
votes
10
replies
9.6k
views
Is lfcShrink only useful only for visualization?
RNA-Seq dseq2 Bioconductor R
5.2 years ago by Fawzi Yassine ▴ 20
3
votes
7
replies
3.9k
views
lfcShrink function in DEseq2 is giving me an error
RNA-Seq
5.2 years ago by Fawzi Yassine ▴ 20
0
votes
2
replies
1.1k
views
getting the test results of multiple transcripts; even though, I am using gene-level analysis
RNA-Seq stringtie
5.2 years ago by Fawzi Yassine ▴ 20
1
vote
1
reply
946
views
Mapping using UCSC and counting using RefSeq
RNA-Seq genome alignment assembly
updated 5.4 years ago by 11k • written 5.4 years ago by ▴ 20
3
votes
4
replies
2.4k
views
Affymetrix Microarray data
gene
6.8 years ago by Fawzi Yassine ▴ 20
11 results • Page 1 of 1
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