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2
votes
7
replies
5.4k
views
6 follow
Memory usage of picard Samsort
Picard SortSam
updated 6 weeks ago by 83k • written 7.3 years ago by ▴ 80
2
votes
1
reply
839
views
How to combine the outputs of repeat annotation softwares
RepeatProteinMasker TRF RepeatMasker RepeatModeler
updated 14 months ago by • 0 • written 2.9 years ago by ▴ 80
2
votes
5
replies
2.1k
views
convention from vcf to plink
plink
updated 2.3 years ago by ▴ 10 • written 5.0 years ago by ▴ 80
0
votes
0
replies
405
views
how to extract the phase 1 sites of codon aligned derived from PAL2NAL
codon PAL2NAL
updated 18 months ago by 44k • written 2.4 years ago by ▴ 80
1
vote
0
replies
522
views
Issues when running r8s for an ultrametric tree
tree orthofinder r8s ultrametric
2.5 years ago by boymin2020 ▴ 80
0
votes
1
reply
732
views
Query about Expansion/Contraction number of the gene families in CAFE
r8s RAxML CAFE
updated 2.5 years ago by ▴ 100 • written 2.5 years ago by ▴ 80
4
votes
13
replies
3.6k
views
6 follow
large number of contigs after assembly
Nanopore genome assembly wtdbg2 sequencing
updated 2.7 years ago by 6.4k • written 2.7 years ago by ▴ 80
0
votes
1
reply
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by boymin2020 ▴ 80
0
votes
1
reply
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by boymin2020 ▴ 80
0
votes
0
replies
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by boymin2020 ▴ 80
0
votes
1
reply
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by boymin2020 ▴ 80
0
votes
1
reply
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by boymin2020 ▴ 80
0
votes
0
replies
829
views
Comment: Comment: About runing Pilon on individual chromosomes when polish draft genome assembly
2.8 years ago by boymin2020 ▴ 80
1
vote
3
replies
829
views
About runing Pilon on individual chromosomes when polish draft genome assembly
Pilon chromosome polish genome draft
updated 16 days ago by ▴ 90 • written 2.8 years ago by ▴ 80
0
votes
0
replies
2.9k
views
Comment: Comment: Issue about "Augustus did not recognize any genes"
3.2 years ago by boymin2020 ▴ 80
0
votes
2
replies
2.9k
views
Comment: Comment: Issue about "Augustus did not recognize any genes"
3.2 years ago by boymin2020 ▴ 80
1
vote
5
replies
2.9k
views
Issue about "Augustus did not recognize any genes"
Augustus BUSCO
3.2 years ago by boymin2020 ▴ 80
0
votes
0
replies
892
views
Comment: C: preprocess of the nanopore seqeucning data
3.2 years ago by boymin2020 ▴ 80
0
votes
0
replies
2.0k
views
Answer: A: ERROR UTR only implemented with shadow and partial or complete. Augustus
3.2 years ago by boymin2020 ▴ 80
1
vote
2
replies
892
views
preprocess of the nanopore seqeucning data
nanopore cat fastq
updated 3.2 years ago by 47k • written 3.2 years ago by ▴ 80
0
votes
0
replies
795
views
Invalid reference index -1 error in Pilon
pilon wtdbg2 long-read assembly
3.5 years ago by boymin2020 ▴ 80
0
votes
1
reply
864
views
Comment: C: softwares for gene prediction on assembly of nanopore sequencing reads
3.5 years ago by boymin2020 ▴ 80
2
votes
3
replies
864
views
softwares for gene prediction on assembly of nanopore sequencing reads
nanopore gene prediction
updated 3.5 years ago by 15k • written 3.5 years ago by ▴ 80
0
votes
0
replies
1.6k
views
Comment: C: Questions about the Getting-started of wtdbg2
3.6 years ago by boymin2020 ▴ 80
1
vote
3
replies
1.6k
views
Questions about the Getting-started of wtdbg2
wtdbg2 nanopore Illumina
updated 3.6 years ago by 35k • written 3.6 years ago by ▴ 80
1
vote
2
replies
863
views
methods/tools to compare/alignment two chromosome-level long DNA sequences
alignment chromosome-level comparative genomics
3.7 years ago by boymin2020 ▴ 80
0
votes
0
replies
863
views
Comment: A: methods/tools to compare/alignment two chromosome-level long DNA sequences
3.7 years ago by boymin2020 ▴ 80
0
votes
0
replies
2.2k
views
Comment: C: Query about memory size usage of Hisat2
4.1 years ago by boymin2020 ▴ 80
0
votes
0
replies
2.2k
views
Comment: C: Query about memory size usage of Hisat2
4.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
2.2k
views
Comment: C: Query about memory size usage of Hisat2
4.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
2.2k
views
Comment: C: Query about memory size usage of Hisat2
4.1 years ago by boymin2020 ▴ 80
0
votes
8
replies
2.2k
views
Query about memory size usage of Hisat2
RNA-Seq Hisat2 silkworm
4.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.2k
views
question about the equation of counts in STAR ReadsPerGene.out.tab
STAR ReadsPerGene.out.tab
updated 4.5 years ago by 35k • written 4.5 years ago by ▴ 80
0
votes
0
replies
2.1k
views
Comment: C: convention from vcf to plink
5.0 years ago by boymin2020 ▴ 80
0
votes
0
replies
2.1k
views
Comment: C: convention from vcf to plink
5.0 years ago by boymin2020 ▴ 80
0
votes
1
reply
853
views
Input for -w options of smartpca.perl
smartpca
5.2 years ago by boymin2020 ▴ 80
4
votes
1
reply
2.4k
views
Questions about gene length and GC content in CQN normaliztion
CQN RNA-Seq gene length GC content
updated 5.3 years ago by ▴ 260 • written 5.5 years ago by ▴ 80
0
votes
0
replies
8.9k
views
Comment: C: Question about the reliability of --check-sex in PLINK2
5.8 years ago by boymin2020 ▴ 80
0
votes
1
reply
8.9k
views
Comment: C: Question about the reliability of --check-sex in PLINK2
5.8 years ago by boymin2020 ▴ 80
0
votes
1
reply
8.9k
views
Comment: C: Question about the reliability of --check-sex in PLINK2
updated 5.8 years ago by 44k • written 5.8 years ago by ▴ 80
5
votes
9
replies
8.9k
views
Question about the reliability of --check-sex in PLINK2
PLINK2 sex-check
updated 5.8 years ago by 10k • written 5.8 years ago by ▴ 80
0
votes
1
reply
1.4k
views
Comment: C: Chromosome lost after merge with vcf-merge
5.8 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.4k
views
Comment: C: Chromosome lost after merge with vcf-merge
5.8 years ago by boymin2020 ▴ 80
1
vote
5
replies
1.4k
views
Chromosome lost after merge with vcf-merge
vcf-merge
5.8 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.1k
views
DE heatmap before or after limma adjustment
Heapmap limma DE
updated 5.8 years ago by 104k • written 5.9 years ago by ▴ 80
0
votes
1
reply
2.1k
views
Comment: C: MaxQuant LFQ data cleanup
5.9 years ago by boymin2020 ▴ 80
1
vote
3
replies
2.1k
views
MaxQuant LFQ data cleanup
MaxQuant
updated 5.9 years ago by 104k • written 5.9 years ago by ▴ 80
0
votes
1
reply
2.5k
views
Comment: C: Read length of RNA-seq from HiSeq 2500
6.1 years ago by boymin2020 ▴ 80
0
votes
1
reply
1.7k
views
pancreatic cancer datasets
pancreatic cancer dataset
updated 6.1 years ago by 88k • written 6.1 years ago by ▴ 80
0
votes
0
replies
1.1k
views
tRNA calling in RNA-seq dataset from a standard sequencing run
rna-seq tRNA methylation
6.1 years ago by boymin2020 ▴ 80
64 results • Page 1 of 2
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