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3
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712
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Comment: Comment: advice on course selection for a bioinformatics career.
14 months ago by benformatics 3.9k
0
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0
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628
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Comment: Comment: Processing fastqs generated by inDrop protocol
14 months ago by benformatics 3.9k
1
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0
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1.1k
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Comment: Comment: samtools idxstats not removing ChrM
14 months ago by benformatics 3.9k
0
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1
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633
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Comment: Comment: Problem in converting SAM to BAM file by DROP SEQ
14 months ago by benformatics 3.9k
1
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0
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1.1k
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Comment: Comment: samtools idxstats not removing ChrM
14 months ago by benformatics 3.9k
0
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0
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1.6k
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Comment: Comment: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
14 months ago by benformatics 3.9k
0
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1
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773
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Comment: Comment: CABSDock:fortran 2018 deleted feature
14 months ago by benformatics 3.9k
1
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0
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548
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Answer: Answer: RNA seq analysis differential expression analysis
14 months ago by benformatics 3.9k
1
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1
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512
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Comment: Comment: Bar plots at genera level with absolute percentage difference between two groups
14 months ago by benformatics 3.9k
0
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1
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4.1k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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1
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4.1k
views
Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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1
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4.1k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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1
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4.1k
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Answer: Answer: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
14 months ago by benformatics 3.9k
0
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0
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700
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Comment: Comment: RNAseq matrix containing zero values
15 months ago by benformatics 3.9k
0
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0
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614
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Answer: Answer: Mate-pair sequencing
15 months ago by benformatics 3.9k
0
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0
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1.8k
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Comment: Comment: change color and scale in SpatialFeaturePlot
16 months ago by benformatics 3.9k
0
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1
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983
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Comment: Comment: Some questions on RAD paired-end sequencing
16 months ago by benformatics 3.9k
0
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1
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983
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Answer: Answer: Some questions on RAD paired-end sequencing
16 months ago by benformatics 3.9k
0
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0
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1.5k
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
16 months ago by benformatics 3.9k
3
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5
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1.5k
views
How to remove un-paired reads from BAM after filtering?
picard samtools
updated 11 months ago by 43k • written 16 months ago by 3.9k
2
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1
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1.5k
views
Answer: Answer: How to remove un-paired reads from BAM after filtering?
16 months ago by benformatics 3.9k
0
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1
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1.5k
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
16 months ago by benformatics 3.9k
1
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0
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907
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Comment: Comment: What exactly are unmappable regions?
16 months ago by benformatics 3.9k
3
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1
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1.4k
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Comment: Comment: Why did my data get worse after trimming with trimmomatic?
16 months ago by benformatics 3.9k
0
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1
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962
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Comment: Comment: Human transcriptome STAR multi-mapped problem
17 months ago by benformatics 3.9k
1
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2
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2.5k
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Comment: Comment: How to find rna strand direction before alignment?
17 months ago by benformatics 3.9k
0
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2
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2.5k
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Comment: Comment: How to find rna strand direction before alignment?
17 months ago by benformatics 3.9k
1
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0
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838
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Answer: Answer: Does anyone have experience using findtail?
17 months ago by benformatics 3.9k
1
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0
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2.5k
views
Answer: Answer: How to find rna strand direction before alignment?
17 months ago by benformatics 3.9k
1
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0
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386
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Answer: Answer: comparison of conditions scRNA-seq
17 months ago by benformatics 3.9k
0
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1
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8.2k
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Comment: Comment: CPM or TPM in GSEA analysis
17 months ago by benformatics 3.9k
1
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1
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1.0k
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Answer: Answer: Treating "patient" as a batch effect
17 months ago by benformatics 3.9k
0
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1
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965
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Comment: Comment: Proportion of mitochondrial reads atac seq
17 months ago by benformatics 3.9k
1
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2
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965
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Answer: Answer: Proportion of mitochondrial reads atac seq
18 months ago by benformatics 3.9k
1
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0
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598
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Answer: Answer: PolyA Tail Detection in RNA-seq data
18 months ago by benformatics 3.9k
1
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1
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642
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Answer: Answer: Extract list of mapped UMIs in cell ranger output
18 months ago by benformatics 3.9k
2
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0
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1.2k
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Answer: Answer: How to get the canonical transcript from gene ensemble ID
18 months ago by benformatics 3.9k
2
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1
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553
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Answer: Answer: Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
18 months ago by benformatics 3.9k
4
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0
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4.2k
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Answer: Answer: Does a PhD or work experience set you up better to do bioinformatics work in ind
4 months ago by benformatics 3.9k
0
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1
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772
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Answer: Answer: How to convert trinotate results into GFF3
18 months ago by benformatics 3.9k
1
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1
reply
879
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Answer: Answer: How to tell if GEO SRA is paired or single?
18 months ago by benformatics 3.9k
1
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0
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1.9k
views
Comment: Comment: How much RAM for scRNAseq 200K cells?
18 months ago by benformatics 3.9k
0
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0
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903
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Comment: Comment: scRNA-Seq datasets with labels
18 months ago by benformatics 3.9k
1
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0
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1.4k
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Answer: Answer: Which Bioinformatics Master's degree is better?
18 months ago by benformatics 3.9k
0
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0
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505
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Answer: Answer: Protein sequence from a gene fusion?
18 months ago by benformatics 3.9k
0
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1
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554
views
Comment: Comment: Does chemistry have significant effects on my single nucleus dataset?
18 months ago by benformatics 3.9k
1
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0
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918
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Comment: Comment: How can I get counts from transgenic expression in RNA-seq data?
18 months ago by benformatics 3.9k
3
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3
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918
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Answer: Answer: How can I get counts from transgenic expression in RNA-seq data?
18 months ago by benformatics 3.9k
0
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0
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840
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Comment: Comment: Why an extremely large number of reads are mapped to several chromosomes in RNA-
18 months ago by benformatics 3.9k
1
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1
reply
903
views
Comment: Comment: scRNA-Seq datasets with labels
19 months ago by benformatics 3.9k
476 results • Page 2 of 10
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