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0
votes
0
replies
475
views
How to sort graph based on fold change and instead of activated and suppressed, how to add up and downregulated in graph header?
clusterprofiler
13 months ago by
sharmatina189059
▴ 110
1
vote
1
reply
487
views
parse csv file
awk
csv
updated 14 months ago by
Ram
43k • written 15 months ago by
sharmatina189059
▴ 110
1
vote
1
reply
607
views
Weighted coexpression network analysis
Networkanalyst
RNASeq
database
STRING
R
updated 16 months ago by
seidel
11k • written 16 months ago by
sharmatina189059
▴ 110
0
votes
1
reply
867
views
Comment:
Comment: bash script error to copy files from multiple directories to one directory
updated 17 months ago by
Ram
43k • written 17 months ago by
sharmatina189059
▴ 110
1
vote
1
reply
867
views
Comment:
Comment: bash script error to copy files from multiple directories to one directory
17 months ago by
sharmatina189059
▴ 110
4
votes
6
replies
867
views
bash script error to copy files from multiple directories to one directory
bash
updated 17 months ago by
Ram
43k • written 17 months ago by
sharmatina189059
▴ 110
0
votes
3
replies
1.4k
views
How to extract multi-line protein sequences with Ids present in headers ?
PERL
awk
Sed
updated 2.2 years ago by
jena
▴ 290 • written 4.1 years ago by
sharmatina189059
▴ 110
0
votes
5
replies
2.2k
views
can we retrieve protein sequences from the clusters of CD-hit?
CD-Hit
protein sequences
updated 2.4 years ago by
Md
▴ 10 • written 3.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
502
views
how to plot genetic struture of bacterial genes?
bacteria
plot
gene
updated 2.7 years ago by
Ram
43k • written 2.8 years ago by
sharmatina189059
▴ 110
1
vote
0
replies
707
views
plot Roary results for oan genome analysis
R
Roary
updated 10 months ago by
Ram
43k • written 2.9 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
480
views
Operon Mapping
SLING
operon
Multigeneblast
3.0 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
2.8k
views
Comment:
C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.3 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
2.8k
views
Comment:
C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.3 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
2.8k
views
Comment:
C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.3 years ago by
sharmatina189059
▴ 110
0
votes
6
replies
2.8k
views
Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
Paml
codeml
SNAP
hyphy
3.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
544
views
codeml.txt file isnot generating.
Codeml
paml
dn/ds
3.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
789
views
How to get variation data from MSA file generated using ClustalW for protein sequences?
clustalw
MSA
variation
updated 3.3 years ago by
Biostar
20 • written 3.3 years ago by
sharmatina189059
▴ 110
6
votes
5
replies
1.2k
views
how to unique a file row-wise?
awk
perl
sed
linux
updated 3.3 years ago by
DareDevil
★ 4.3k • written 3.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
1.2k
views
Comment:
C: how to unique a file row-wise?
3.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
1.2k
views
Comment:
C: how to unique a file row-wise?
3.3 years ago by
sharmatina189059
▴ 110
0
votes
2
replies
884
views
How to read a multiple sequence alignment file?
Multiple-sequence-alignment
updated 12 months ago by
Ram
43k • written 3.3 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
2.2k
views
Comment:
C: can we retrieve protein sequences from the clusters of CD-hit?
updated 3.3 years ago by
Ram
43k • written 3.3 years ago by
sharmatina189059
▴ 110
4
votes
2
replies
914
views
How Can I plot this data in a heatmap?
R
Heatmap
Pathways
Uniprot
updated 3.5 years ago by
Alex Reynolds
35k • written 3.5 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
869
views
Comment:
C: Mapping a draft sequence to a finished sequence using MUMmer.
3.6 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
869
views
Comment:
C: Mapping a draft sequence to a finished sequence using MUMmer.
3.6 years ago by
sharmatina189059
▴ 110
0
votes
4
replies
869
views
Mapping a draft sequence to a finished sequence using MUMmer.
MUMmer
3.6 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
869
views
Comment:
A: Mapping a draft sequence to a finished sequence using MUMmer.
3.6 years ago by
sharmatina189059
▴ 110
6
votes
10
replies
3.5k
views
Retrieve multi-line fasta sequences using list of locus tag
sequence
updated 3.7 years ago by
simiyu86wekesa
• 0 • written 5.9 years ago by
sharmatina189059
▴ 110
0
votes
2
replies
748
views
why this code is not deleting entries from mysql table?
php
mysql
updated 3.8 years ago by
Biostar
20 • written 3.9 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
748
views
Comment:
C: why this code is not deleting entries from mysql table?
3.9 years ago by
sharmatina189059
▴ 110
0
votes
2
replies
1.0k
views
Comment:
C: One gene shows alignment with core sequences as well as with accessory gene sequ
4.1 years ago by
sharmatina189059
▴ 110
2
votes
4
replies
1.0k
views
One gene shows alignment with core sequences as well as with accessory gene sequences at 50% identity?
Pan-Genome with BPGA
BPGA
updated 4.1 years ago by
Mensur Dlakic
★ 27k • written 4.1 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
646
views
Comment:
C: Why blast with same query sequence shows two different query length?
4.1 years ago by
sharmatina189059
▴ 110
0
votes
3
replies
646
views
Why blast with same query sequence shows two different query length?
blast
updated 4.1 years ago by
GenoMax
142k • written 4.1 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
884
views
Comment:
C: Why Genome coverage is missing for some assemblies?
4.2 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
884
views
Comment:
C: Why Genome coverage is missing for some assemblies?
4.2 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
884
views
Comment:
C: Why Genome coverage is missing for some assemblies?
4.2 years ago by
sharmatina189059
▴ 110
0
votes
6
replies
884
views
Why Genome coverage is missing for some assemblies?
next-gen
Genome coverage
updated 4.2 years ago by
andres.firrincieli
3.6k • written 4.2 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
823
views
Comment:
C: automate command using bash or perl script?
4.3 years ago by
sharmatina189059
▴ 110
0
votes
4
replies
823
views
automate command using bash or perl script?
assembly
RAST
PERL
BASH
updated 4.3 years ago by
JC
13k • written 4.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
935
views
Comment:
C: Setting up local blast in webserver
4.3 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
935
views
Comment:
C: Setting up local blast in webserver
4.3 years ago by
sharmatina189059
▴ 110
0
votes
4
replies
935
views
Setting up local blast in webserver
BLAST PHP and MYSQL
4.3 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
2.3k
views
Comment:
C: Create Dataset from reads -- IndexError: list index out of range
4.4 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
2.3k
views
Comment:
C: Create Dataset from reads -- IndexError: list index out of range
4.4 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
2.3k
views
Comment:
C: Create Dataset from reads -- IndexError: list index out of range
4.4 years ago by
sharmatina189059
▴ 110
0
votes
1
reply
1.7k
views
Pathway annotation using sequence alignment
alignment
KEGG
BLASTKOALA
updated 4.9 years ago by
Biostar
20 • written 6.5 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
1.0k
views
Pan-genome using BPGA
genome
4.9 years ago by
sharmatina189059
▴ 110
0
votes
0
replies
1.3k
views
Comment:
C: Discriminating ortholog and paralogs using Cd-hit
5.2 years ago by
sharmatina189059
▴ 110
1
vote
2
replies
1.3k
views
Discriminating ortholog and paralogs using Cd-hit
genome
gene
5.2 years ago by
sharmatina189059
▴ 110
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