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5
votes
6
replies
528
views
biological meaning /summary for similar sets of GO terms
annotation GO
updated 9 weeks ago by 100k • written 9 weeks ago by ★ 1.3k
0
votes
0
replies
528
views
Comment: Comment: biological meaning /summary for similar sets of GO terms
9 weeks ago by lessismore ★ 1.3k
1
vote
1
reply
288
views
Huge TPM values in some tissues of an expression atlas
gene expression
updated 10 weeks ago by ★ 16k • written 10 weeks ago by ★ 1.3k
0
votes
1
reply
979
views
Comment: Comment: How to filter out non-plant KEGG pathways in KEGG enrichment?
4 months ago by lessismore ★ 1.3k
0
votes
1
reply
792
views
Comment: Comment: R package for functional enrichment and depletion analysis
13 months ago by lessismore ★ 1.3k
1
vote
3
replies
792
views
R package for functional enrichment and depletion analysis
enrichment depletion
updated 13 months ago by 13k • written 13 months ago by ★ 1.3k
0
votes
0
replies
572
views
Comment: Comment: In silico evaluation of functional similarity across two sets of genes
14 months ago by lessismore ★ 1.3k
1
vote
2
replies
572
views
In silico evaluation of functional similarity across two sets of genes
functional annotation GO similarity
14 months ago by lessismore ★ 1.3k
0
votes
0
replies
899
views
Comment: Comment: Build a 3d protein model to compare two TF alleles and test in-silico the protei
14 months ago by lessismore ★ 1.3k
1
vote
2
replies
899
views
Build a 3d protein model to compare two TF alleles and test in-silico the protein-DNA binding efficiency
protein-modelling protein-DNA-binding
14 months ago by lessismore ★ 1.3k
13
votes
15
replies
15k
views
7 follow
Error in while (change > conv) { : missing value where TRUE/FALSE needed
Combat Batch-effect RNA-Seq
updated 3 months ago by 43k • written 6.6 years ago by ★ 1.3k
0
votes
0
replies
391
views
Get the most downstream term from a list of semantically similar GO terms
GO annotation
21 months ago by lessismore ★ 1.3k
0
votes
0
replies
4.8k
views
Comment: Comment: Configuring sleuth for log2FC - What are the dangers?
21 months ago by lessismore ★ 1.3k
0
votes
3
replies
1.2k
views
updated GO dataframe in R
r.gene ontology
updated 2.2 years ago by 7.5k • written 2.2 years ago by ★ 1.3k
6
votes
7
replies
1.5k
views
GO redundancy reduction
R enrichment
updated 2.2 years ago by ▴ 20 • written 4.9 years ago by ★ 1.3k
0
votes
0
replies
1.2k
views
Comment: Comment: updated GO dataframe in R
2.2 years ago by lessismore ★ 1.3k
0
votes
0
replies
368
views
N stretchs in high confidence genes
gene annotation family Nstretch
2.4 years ago by lessismore ★ 1.3k
0
votes
0
replies
1.7k
views
Comment: Comment: how to de-aggregate a table in R
2.5 years ago by lessismore ★ 1.3k
0
votes
0
replies
2.2k
views
Circlize - Error: not enough space for cells at track index '5'.
circlize
2.5 years ago by lessismore ★ 1.3k
1
vote
1
reply
672
views
ka/ks for comparing more than 2 protein sequences
selection
updated 2.6 years ago by ▴ 510 • written 2.6 years ago by ★ 1.3k
0
votes
1
reply
1.8k
views
Comment: Comment: biomaRt does not convert entrez gene id to ensembl gene id
2.6 years ago by lessismore ★ 1.3k
0
votes
0
replies
6.0k
views
Comment: Comment: How to know synonymous and non-synonymous SNPs from transcriptome sequencing
2.6 years ago by lessismore ★ 1.3k
0
votes
1
reply
6.0k
views
Comment: Comment: How to know synonymous and non-synonymous SNPs from transcriptome sequencing
2.6 years ago by lessismore ★ 1.3k
0
votes
1
reply
6.9k
views
Difference between "Original tree" and "Bootstrap consensus tree" in Mega X software for phylogeny
Mega Phylogeny
updated 2.9 years ago by • 0 • written 3.5 years ago by ★ 1.3k
0
votes
0
replies
657
views
FIMO --max-stored-scores option
fimo meme
3.2 years ago by lessismore ★ 1.3k
0
votes
0
replies
553
views
Get full output with hmmscan in bio3d
bio3d
3.2 years ago by lessismore ★ 1.3k
2
votes
0
replies
911
views
Answer: A: Extract column which contain <20 exons in a transcript
3.2 years ago by lessismore ★ 1.3k
2
votes
0
replies
1.6k
views
Comment: C: What are the best scATAC-seq computational pipelines / tools / literature curren
3.2 years ago by lessismore ★ 1.3k
1
vote
1
reply
1.3k
views
Comment: A: Plot phylogenetic tree with all ancestor nodes
3.2 years ago by lessismore ★ 1.3k
1
vote
0
replies
1.1k
views
Comment: C: Cytoscape - long list of proteins, very messy result
3.2 years ago by lessismore ★ 1.3k
1
vote
0
replies
508
views
Compare the output of two MEME analyses
meme motif analysis
3.2 years ago by lessismore ★ 1.3k
1
vote
1
reply
1.6k
views
Comment: C: Kept getting issue when using ImmGenData() in SingleR
3.2 years ago by lessismore ★ 1.3k
2
votes
0
replies
831
views
Comment: C: Retrieve initial query in getBM()
3.2 years ago by lessismore ★ 1.3k
3
votes
1
reply
670
views
Answer: C: Reorder "matrix" "array"
3.2 years ago by lessismore ★ 1.3k
1
vote
1
reply
827
views
Comment: C: Problems with the same gene names in R, any help?
3.3 years ago by lessismore ★ 1.3k
0
votes
1
reply
827
views
Answer: A: Problems with the same gene names in R, any help?
3.3 years ago by lessismore ★ 1.3k
2
votes
1
reply
1.3k
views
Comment: C: diferentially expressed ensembl ID to gene symbol conversion
3.3 years ago by lessismore ★ 1.3k
1
vote
1
reply
1.3k
views
Answer: C: diferentially expressed ensembl ID to gene symbol conversion
3.3 years ago by lessismore ★ 1.3k
0
votes
0
replies
9.2k
views
Comment: C: How do I extract Fasta Sequences based on a list of IDs?
3.3 years ago by lessismore ★ 1.3k
0
votes
0
replies
585
views
Compare TFBS of a specific set of genes across two species
structural diversity comparative genomics
3.3 years ago by lessismore ★ 1.3k
0
votes
0
replies
720
views
Comment: C: Filter for nonoverlapping genomic hits and keep the longest one
3.3 years ago by lessismore ★ 1.3k
1
vote
2
replies
720
views
Filter for nonoverlapping genomic hits and keep the longest one
genomic ranges genomics filtering
updated 3.3 years ago by 13k • written 3.3 years ago by ★ 1.3k
0
votes
0
replies
2.6k
views
Comment: C: Filtering the result of transcription factor binding matrix prediction from PWM
3.3 years ago by lessismore ★ 1.3k
0
votes
0
replies
868
views
Comment: C: Revive old microarray data linking it to new gene annotations
3.6 years ago by lessismore ★ 1.3k
0
votes
0
replies
868
views
Comment: C: Revive old microarray data linking it to new gene annotations
3.6 years ago by lessismore ★ 1.3k
2
votes
4
replies
868
views
Revive old microarray data linking it to new gene annotations
microarray annotations integration
3.6 years ago by lessismore ★ 1.3k
0
votes
0
replies
1.2k
views
Comment: C: Download entire gene sequences (including UTRs) with BioMart-Ensembl
3.6 years ago by lessismore ★ 1.3k
0
votes
1
reply
1.2k
views
Comment: C: Download entire gene sequences (including UTRs) with BioMart-Ensembl
3.6 years ago by lessismore ★ 1.3k
3
votes
5
replies
1.2k
views
Download entire gene sequences (including UTRs) with BioMart-Ensembl
ensembl genomes UTR
3.6 years ago by lessismore ★ 1.3k
0
votes
0
replies
1.4k
views
Comment: C: Bulk Download all CDS and UTRs of known genes from ENSEMBL
3.6 years ago by lessismore ★ 1.3k
271 results • Page 1 of 6
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