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710
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Answer: Answer: How to compare the quality of assemblies
25 days ago by shelkmike ★ 1.2k
1
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1
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814
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Answer: Answer: Porechop output?
10 weeks ago by shelkmike ★ 1.2k
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0
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297
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Answer: Answer: About getorf result
10 weeks ago by shelkmike ★ 1.2k
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575
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Answer: Answer: make a heat map with python
3 months ago by shelkmike ★ 1.2k
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1
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441
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Answer: Answer: Why statistic test should I use?
3 months ago by shelkmike ★ 1.2k
1
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0
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282
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Answer: Answer: What could be a better K-mer for my WGS assembly task using ABySS, with my curre
3 months ago by shelkmike ★ 1.2k
2
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1
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1.3k
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Answer: Answer: How can I identify single-copy genes in a specific genome?
3 months ago by shelkmike ★ 1.2k
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0
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251
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Answer: Answer: Genome Analysis Insights: BUSCO Evaluation of Repetitive Elements and Ploidy Lev
3 months ago by shelkmike ★ 1.2k
1
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0
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339
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Comment: Comment: Illumina reads to be processed and prepared for reference genome alignment
3 months ago by shelkmike ★ 1.2k
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0
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2.6k
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Answer: Answer: BLAST dot matrix output from command line
4 months ago by shelkmike ★ 1.2k
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14k
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Answer: Answer: Make A Dotplot From Blast Alignment
4 months ago by shelkmike ★ 1.2k
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2
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406
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Tool: Dot_plot_like_in_BLAST, a standalone tool for making dot plots similar to what online BLAST makes
Megablast Blastn dot plot dotplot BLAST
updated 4 months ago by 43k • written 4 months ago by ★ 1.2k
0
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465
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Answer: Answer: Obtain satellite DNA monomer from dot plot
4 months ago by shelkmike ★ 1.2k
1
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0
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351
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Comment: Comment: RepeatModeler-2.0 BuildDatabase error
6 months ago by shelkmike ★ 1.2k
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1
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528
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Comment: Comment: Abyss results
6 months ago by shelkmike ★ 1.2k
2
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1
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528
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Answer: Answer: Abyss results
6 months ago by shelkmike ★ 1.2k
1
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0
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513
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Answer: Answer: improving genome sequence read depth and confidence by combining sequences from
6 months ago by shelkmike ★ 1.2k
1
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1
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413
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Answer: Answer: Strange BUSCO selected sequences
6 months ago by shelkmike ★ 1.2k
1
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1
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436
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Answer: Answer: Bacterial RNA-seq GC%
7 months ago by shelkmike ★ 1.2k
2
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0
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402
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Answer: Answer: Using sequence percent similarity from alignments to compare duplication events
7 months ago by shelkmike ★ 1.2k
2
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1
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748
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Comment: Comment: Query regarding genome coverage in de-novo assembly
7 months ago by shelkmike ★ 1.2k
1
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1
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569
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Answer: Answer: Hifiasm coverage rd:i:0
7 months ago by shelkmike ★ 1.2k
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1
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748
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Answer: Answer: Query regarding genome coverage in de-novo assembly
7 months ago by shelkmike ★ 1.2k
0
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1
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1.1k
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Comment: Comment: Alignment of mirna on specific organism data from mirbase
7 months ago by shelkmike ★ 1.2k
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1
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1.1k
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Answer: Answer: Alignment of mirna on specific organism data from mirbase
7 months ago by shelkmike ★ 1.2k
0
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1
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766
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Comment: Comment: Assessing Rockhopper's output
7 months ago by shelkmike ★ 1.2k
0
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1
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766
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Answer: Answer: Assessing Rockhopper's output
7 months ago by shelkmike ★ 1.2k
0
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0
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950
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Answer: Answer: Recommendations for extending contigs from denovo assembly to identify SV insert
7 months ago by shelkmike ★ 1.2k
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1
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467
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Answer: Answer: ptt and rnt files that were created from assembly rather than a genome
7 months ago by shelkmike ★ 1.2k
1
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0
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499
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Answer: Answer: bedGraph for Coverage of Insert from Paired-End Data?
7 months ago by shelkmike ★ 1.2k
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0
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882
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Answer: Answer: How/why contigs and scaffolds end up being identical in number and length by spa
9 months ago by shelkmike ★ 1.2k
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0
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908
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Answer: Answer: Mitochondrial contig identification in fungal genome assemblies
9 months ago by shelkmike ★ 1.2k
0
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0
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604
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Answer: Answer: Organelle genome assembly did not circularize and I am not sure why
9 months ago by shelkmike ★ 1.2k
0
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1
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728
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Answer: Answer: codeml analysis for multiple alignments
9 months ago by shelkmike ★ 1.2k
0
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0
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698
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Answer: Answer: Extract FASTA sequences from the nr.gz database
9 months ago by shelkmike ★ 1.2k
0
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0
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725
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Answer: Answer: What are the offline tools available for the Eukaryotic genome annotation (inclu
10 months ago by shelkmike ★ 1.2k
0
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0
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609
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Answer: Answer: Using tRNAscan-SE for mitochondria tRNA from microeukaryotes like protists and y
10 months ago by shelkmike ★ 1.2k
1
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0
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883
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Answer: Answer: Visualize mitochondrial genome
11 months ago by shelkmike ★ 1.2k
2
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1
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797
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Answer: Answer: How does ncbi-blastP calculate the score ? (Why it is lower than mean-diagonal
11 months ago by shelkmike ★ 1.2k
0
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0
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872
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Answer: Answer: ABySS genome assembler
11 months ago by shelkmike ★ 1.2k
0
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1
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706
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Answer: Answer: how to perform phylogeny to know the evolution of strains
12 months ago by shelkmike ★ 1.2k
0
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0
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564
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Comment: Comment: How to analyze GO term
12 months ago by shelkmike ★ 1.2k
0
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0
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597
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Comment: Comment: How to remove the contaminant reads from plants sequencing
13 months ago by shelkmike ★ 1.2k
1
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1
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958
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Comment: Comment: Seqtk
13 months ago by shelkmike ★ 1.2k
0
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1
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509
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Comment: Comment: OrthoFinder problem
13 months ago by shelkmike ★ 1.2k
0
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0
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1.5k
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Answer: Answer: Bad quality fastq files for analysis
14 months ago by shelkmike ★ 1.2k
0
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0
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36k
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Comment: Comment: How Do I Convert Fa Files To Bed Format?
14 months ago by shelkmike ★ 1.2k
0
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0
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491
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Answer: Answer: How do I compare evolutionary estimates between two sequence groups in codeML?
14 months ago by shelkmike ★ 1.2k
1
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0
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751
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Comment: Comment: database for better classification of illumina contigs
15 months ago by shelkmike ★ 1.2k
0
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1
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751
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Answer: Answer: database for better classification of illumina contigs
15 months ago by shelkmike ★ 1.2k
178 results • Page 1 of 4
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