Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : today
all time
today
this week
this month
this year
16 results • Page
1 of 1
Sort: Votes
Rank
Views
Votes
Replies
2
votes
9
replies
1.1k
views
HGVS Nomenclature of Multiple Indels found in Cis
Nomenclature
HGVS
18 hours ago by
LauferVA
4.2k
0
votes
0
replies
62
views
Tool for within-sample ligand-receptor analysis (bulk RNA-seq) ?
cell-cell
communication
ligand-receptor
self-regulation
15 hours ago by
DGTool
▴ 20
0
votes
0
replies
71
views
handling bio replicates for chromHMM
replicates
chromHMM
15 hours ago by
Hasan_Daaboul
• 0
0
votes
4
replies
272
views
scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
rna-seq
11 hours ago by
Bibi
• 0
0
votes
0
replies
56
views
Challenges of Affymetrix probe IDs for grouping similar genes to calculate their mean
R
Mean
Affymetrix
Probes
Grouping
10 hours ago by
Maryam
• 0
0
votes
2
replies
209
views
BiomartException: Query ERROR for existing dataset in BioMart
biomart
ensembl
wheat
python
pybiomart
6 hours ago by
Luqman
• 0
0
votes
3
replies
248
views
What marks a De-Novo Genome assembly as FAILED?
nanopore
denovo
illumina
assembly
genome
updated 3 hours ago by
nd48
▴ 20 • written 2 days ago by
Umer
▴ 50
0
votes
1
reply
45
views
How to find identical sequences in genome fasta file (by Python or any possible program) ?
fasta
identical
sequences.
updated 2 hours ago by
Pierre Lindenbaum
161k • written 2 hours ago by
Sony
▴ 10
0
votes
1
reply
54
views
Functional enrichment analysis for unique gene IDs
RNA-SEQ
updated 2 hours ago by
ATpoint
82k • written 4 hours ago by
Pegasus
▴ 100
0
votes
1
reply
70
views
GO analysis: p-value range
GO
R
updated 1 hour ago by
marco.barr
▴ 130 • written 8 hours ago by
sooni
▴ 20
0
votes
3
replies
46
views
Why most genes have high padj values
deg
padj
bulkRNA
updated 1 hour ago by
ATpoint
82k • written 1 hour ago by
mnx0723
• 0
0
votes
0
replies
20
views
transcriptome annotation
annotation
transcriptome
cone
trinity
snails
conus
genome
59 minutes ago by
Asim Bin Arshad
• 0
0
votes
0
replies
8
views
How to deal with possibly important predictors omitted during the building of an OLS multivariant linear regression model?
multivariant-linear-regression
confounding
17 minutes ago by
JorgeVallejo
▴ 20
0
votes
1
reply
53
views
PCA Visualization error in R - arguments imply differing number of rows
SNPs
PCA
GBS
LINUX
r
updated 18 minutes ago by
zx8754
11k • written 5 hours ago by
Ali
• 0
0
votes
0
replies
7
views
ENCORI or starBase : ceRNA data retrieval using Web API and curl
ceRNA
ENCORI
curl
microRNA
starBase
12 minutes ago by
V_Vibes
• 0
0
votes
1
reply
46
views
Error in using BioSampleParser tool: subscript out of bounds
R
updated just now by
marco.barr
▴ 130 • written 7 hours ago by
Mohamed Samir
▴ 20
16 results • Page
1 of 1
Recent Votes
Answer: Q: GenomeScope input and how to interpret the results
Answer: How to find tandem duplications pattern in a DNA sequence
A: How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Seque
C: Snakemake vs. Nextflow: strengths and weaknesses
Answer: workflow management system : WDL, CWL, Ruffus, SnakeMake, etc
Sequence alignment on split read event such as inversion, duplication and complex nested events.
ICGEB - SLIBTEC NGS Workshop: Won Best Oral Presentation Award
Recent Locations •
All
Hong Kong,
just now
Italy,
just now
Italy,
just now
Iran,
1 minute ago
United Kingdom,
1 minute ago
Athens,
4 minutes ago
Taiwan,
4 minutes ago
Recent Awards •
All
Popular Question
to
Raghad
• 0
Scholar
to
Pierre Lindenbaum
161k
Voter
to
Sara
▴ 30
Popular Question
to
carlopecoraro2
★ 2.5k
Popular Question
to
scideas
▴ 30
Popular Question
to
Muhammad
• 0
Popular Question
to
synat.keam
▴ 100
Recent Replies
Comment: Add stats to the plot
by
Ghada
• 0
Thanks, thats really helpful ![enter image description here][1] ![enter image description here][2] [1]: /media/images/0470f3dc-5945-…
Comment: PCA Visualization error in R
by
marco.barr
▴ 130
SNPRelate is an R package that is able to read from VCF files directly and perform PCA and IBD/IBS. See the documentation for details in Bi…
Comment: Why most genes have high padj values
by
ATpoint
82k
788 differential genes is a lot. What is the problem?
Comment: Why most genes have high padj values
by
mnx0723
• 0
Sorry, I made edits.
Comment: Why most genes have high padj values
by
Pierre Lindenbaum
161k
Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the cod…
Comment: GO analysis: p-value range
by
marco.barr
▴ 130
Try adding: `scale_y_continuous(breaks=seq(0, max_count, by=0.05))`
Comment: Functional enrichment analysis for unique gene IDs
by
ATpoint
82k
If these genes do not have a symbol then it is utterly unlikely that anyone has looked at their function. I would get their Ensembl IDs and…
Comment: Add stats to the plot
by
marco.barr
▴ 130
The error is likely due to the fact that the structure of your data in data4.ts and data2.ts may not contain the Condition values. The grou…
Comment: How to find identical sequences in genome fasta file (by Python or any possible
by
Pierre Lindenbaum
161k
+ https://www.biostars.org/p/3003/ + https://www.biostars.org/p/9550118/ + https://www.biostars.org/p/158148/
Answer: How to find tandem duplications pattern in a DNA sequence
by
micah
▴ 30
I built a web application can directly find repeat unit and repeat times, try it at http://64.64.240.35:8050/. ![Dot plot][1] ![5 tandem …
Comment: What marks a De-Novo Genome assembly as FAILED?
by
nd48
▴ 20
I would urge you to consider different approaches for benchmarking before deciding on one. In particular, I found that assembling long read…
Comment: BiomartException: Query ERROR for existing dataset in BioMart
by
Luqman
• 0
I am using *pybiomart* which has Server inplace of BiomartServer, I used that as per above but still getting the same error. Also, when I a…
Comment: Blastn, need help to increase speed
by
m13113153781
• 0
mmseq2 is indeed a good acceleration solution, but its index files require ~ 6 T space....
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
KHURRAM SHAHZAD
• 0
Thank you it works
Answer: Add stats to the plot
by
Ghada
• 0
I think this is what caused the error. we do not have group 1 and 2 in the statistical test results???? ![enter image description here][…
Traffic: 1963 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6