StringID to Ensembl ID
1
0
Entering edit mode
19 months ago
kamalika • 0

Hi,

How can I convert stringID to ensembl ID using python? The mapping identifier API convert gene symbols/ensembl ID to stringID but not vice-versa. Is there any other way?

Thanks

stringdbapi script EnsemblId python stringId • 784 views
ADD COMMENT
1
Entering edit mode
19 months ago

Not a python solution but you can do this with the R bioconductor package STRINGdb. Alternatively, you can download the protein aliases data from the download section of the STRING website and write a script to extract the info you need.

ADD COMMENT

Login before adding your answer.

Traffic: 2285 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6