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Comment: Comment: RNAseq: units (TPM +0.001).
21 months ago by always_learning ★ 1.1k
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1.0k
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Comment: C: Method to classify given sample into subtype
3.6 years ago by always_learning ★ 1.1k
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1
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1.1k
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Comment: C: RNA Seq and Somatic Calls for the Cancer data
3.7 years ago by always_learning ★ 1.1k
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1.1k
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Comment: C: RNA Seq and Somatic Calls for the Cancer data
3.7 years ago by always_learning ★ 1.1k
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7.0k
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Comment: C: GISTIC input parameters.
3.7 years ago by always_learning ★ 1.1k
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1.3k
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Comment: C: low genomic inflation factor
3.8 years ago by always_learning ★ 1.1k
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1
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5.9k
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Comment: C: genomic inflation factor calculation
3.8 years ago by always_learning ★ 1.1k
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1
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2.9k
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Comment: C: How to annotate structural variants in VCF with esv/nsv identifiers
4.2 years ago by always_learning ★ 1.1k
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2.9k
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Comment: C: How to annotate structural variants in VCF with esv/nsv identifiers
4.2 years ago by always_learning ★ 1.1k
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2.6k
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Comment: C: Can Homozygous Snps Be Used To Construct A Phylogeny?
updated 4.4 years ago by 43k • written 10.5 years ago by ★ 1.1k
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1
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7.7k
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Comment: C: GenomeStudio genotype format to VCF?
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 1.1k
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5.9k
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Comment: C: PLINK .bim file shows chromosome 0 on Affymetrix chip
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 1.1k
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1
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29k
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Comment: A: Sift Or Polyphen
4.4 years ago by always_learning ★ 1.1k
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1
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29k
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Comment: A: Sift Or Polyphen
4.5 years ago by always_learning ★ 1.1k
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1
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4.1k
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Comment: C: Somatic indel calling with Pindel
4.5 years ago by always_learning ★ 1.1k
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0
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3.5k
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Comment: C: How to convert maf file format to oncoPrint matrix (ComplexHeatmap package)?
4.6 years ago by always_learning ★ 1.1k
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2.7k
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Comment: C: TCGA TMB: What exome size to use?
4.6 years ago by always_learning ★ 1.1k
0
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1
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20k
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Comment: C: How To Split A .Vcf.Gz File
updated 4.7 years ago by 43k • written 9.6 years ago by ★ 1.1k
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0
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7.8k
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Comment: C: MeDip-seq data interpretation + analysis / MEDIPS, MACS2
4.8 years ago by always_learning ★ 1.1k
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0
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6.9k
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Comment: C: Using parallel with Mem
updated 5.1 years ago by 87k • written 10.0 years ago by ★ 1.1k
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1
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17k
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Comment: C: Best tool for variant calling
5.2 years ago by always_learning ★ 1.1k
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1
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17k
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Comment: C: Best tool for variant calling
5.2 years ago by always_learning ★ 1.1k
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0
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9.1k
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Comment: C: Installing Bwa On 32 Bit Unix Machine
updated 5.3 years ago by 43k • written 10.7 years ago by ★ 1.1k
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1
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9.1k
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Comment: C: Installing Bwa On 32 Bit Unix Machine
updated 5.3 years ago by 43k • written 10.7 years ago by ★ 1.1k
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4.7k
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Comment: C: Illumina Read Quality
updated 5.3 years ago by 43k • written 10.7 years ago by ★ 1.1k
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1
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2.0k
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Comment: C: VCFParseError: ploidy > 2 not supported
5.4 years ago by always_learning ★ 1.1k
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1
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2.0k
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Comment: C: VCFParseError: ploidy > 2 not supported
5.4 years ago by always_learning ★ 1.1k
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0
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1.7k
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Comment: C: AF comparison between two population.
5.6 years ago by always_learning ★ 1.1k
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0
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1.7k
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Comment: C: AF comparison between two population.
5.6 years ago by always_learning ★ 1.1k
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0
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1.7k
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Comment: C: AF comparison between two population.
5.6 years ago by always_learning ★ 1.1k
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1
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1.7k
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Comment: C: AF comparison between two population.
5.6 years ago by always_learning ★ 1.1k
0
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1
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5.9k
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Comment: A: VCF file period symbol in the genotype
5.7 years ago by always_learning ★ 1.1k
0
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1
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4.9k
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Comment: C: Subset VCF file by comparing CHROM,POS,REF and ALT
5.7 years ago by always_learning ★ 1.1k
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1
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4.9k
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Comment: C: Subset VCF file by comparing CHROM,POS,REF and ALT
updated 5.7 years ago by 43k • written 5.7 years ago by ★ 1.1k
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1
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27k
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Comment: C: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format
5.8 years ago by always_learning ★ 1.1k
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3.9k
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Comment: C: Extracting upstream and Downstream of a Gene based on different intervals
5.9 years ago by always_learning ★ 1.1k
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0
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89k
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Comment: C: Extract Sub-Set Of Regions From Vcf File
6.3 years ago by always_learning ★ 1.1k
0
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1
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.7 years ago by always_learning ★ 1.1k
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0
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1.3k
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Comment: C: Extract KEGG Enzyme data
7.0 years ago by always_learning ★ 1.1k
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0
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2.1k
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Comment: C: Error in DADA2
7.0 years ago by always_learning ★ 1.1k
4
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0
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4.1k
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Comment: C: GATK - gene panel VCF - too many variants - how to filter out
7.0 years ago by always_learning ★ 1.1k
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1
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6.7k
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Comment: C: Tool Recommendations For Human Genome Assembly
7.0 years ago by always_learning ★ 1.1k
0
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1
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95k
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Comment: A: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.1 years ago by always_learning ★ 1.1k
0
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1
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95k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.1 years ago by always_learning ★ 1.1k
0
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0
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11k
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Comment: Comment: How to interpret heterozygosity rate ?
updated 19 months ago by 43k • written 7.1 years ago by ★ 1.1k
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3.4k
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Comment: C: Importing huge data into GenABEL
7.1 years ago by always_learning ★ 1.1k
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0
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14k
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Comment: C: How To Get A List Of All Correlated Snps (In Ld) With Another List Of Snps?
7.2 years ago by always_learning ★ 1.1k
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1
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14k
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Comment: C: How To Get A List Of All Correlated Snps (In Ld) With Another List Of Snps?
7.2 years ago by always_learning ★ 1.1k
0
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1
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1.5k
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Comment: C: Searching for specific sequences in WGS data
7.5 years ago by always_learning ★ 1.1k
0
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0
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4.0k
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Comment: C: Pysam fetch for records not exists in VCF files
7.5 years ago by always_learning ★ 1.1k
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