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263
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Visualize and explore eventalign data against reference
igv minimap nanopolish nanopore ngs
5 months ago by noodle ▴ 580
3
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1
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704
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Answer: Answer: How to obtain data on the coordinates of the Exon region from UCSC
5 months ago by noodle ▴ 580
0
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1
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536
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Comment: Comment: SP500 useable read lengths
6 months ago by noodle ▴ 580
0
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1
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536
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Comment: Comment: SP500 useable read lengths
6 months ago by noodle ▴ 580
5
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5
replies
536
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SP500 useable read lengths
Illumina NovaSeq NGS
updated 6 months ago by 142k • written 6 months ago by ▴ 580
0
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1
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512
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Comment: Comment: Complexity curve for PE fastq files
6 months ago by noodle ▴ 580
1
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3
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512
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Complexity curve for PE fastq files
complexity fastq
updated 6 months ago by 20k • written 6 months ago by ▴ 580
0
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0
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520
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Comment: Comment: cutadapt 'cut_prefix' substring
7 months ago by noodle ▴ 580
0
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3
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520
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cutadapt 'cut_prefix' substring
cutadapt
7 months ago by noodle ▴ 580
0
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0
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277
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Pileup of inner distance for PE reads
picard samtools pileup RNA-seq
updated 10 months ago by 43k • written 10 months ago by ▴ 580
17
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9
replies
7.2k
views
6 follow
T2T-CHM13 "complete" human genome gff/gtf annotation file
genomics
updated 13 months ago by 142k • written 3.0 years ago by ▴ 580
0
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0
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573
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Comment: Comment: pileup consolidation tool
15 months ago by noodle ▴ 580
0
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0
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573
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Comment: Comment: pileup consolidation tool
15 months ago by noodle ▴ 580
0
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3
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573
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pileup consolidation tool
RNAseq pileup jacusa samtools
15 months ago by noodle ▴ 580
3
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0
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903
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Answer: Answer: samtools markdup in Rsamtools
15 months ago by noodle ▴ 580
0
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0
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459
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Answer: Answer: NGS data analysis
16 months ago by noodle ▴ 580
0
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0
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780
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Answer: Answer: Classifying shotgun metagenomes with 16S rRNA database.
16 months ago by noodle ▴ 580
0
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1
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1.2k
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Comment: Comment: How to check for Over or Under-marking Duplicates in BAM files
16 months ago by noodle ▴ 580
0
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1
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983
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Answer: Answer: Some questions on RAD paired-end sequencing
16 months ago by noodle ▴ 580
0
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0
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1.1k
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Comment: Comment: information about genes from different databases and patents
16 months ago by noodle ▴ 580
1
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1
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1.1k
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Comment: Comment: information about genes from different databases and patents
16 months ago by noodle ▴ 580
1
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2
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1.1k
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Answer: Answer: information about genes from different databases and patents
16 months ago by noodle ▴ 580
0
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0
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350
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Table summary for SNP linkages from same read
NGS SNP RNAseq
16 months ago by noodle ▴ 580
1
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1
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1.7k
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Answer: Answer: Is removing rRNAs, tRNAs, etc really a necessary step in the miRNA analysis?
16 months ago by noodle ▴ 580
0
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0
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2.7k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
16 months ago by noodle ▴ 580
1
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0
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2.7k
views
Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
16 months ago by noodle ▴ 580
1
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1
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2.7k
views
Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
16 months ago by noodle ▴ 580
0
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1
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734
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Comment: Comment: create 'negative' bed annotation from bed
17 months ago by noodle ▴ 580
4
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3
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734
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create 'negative' bed annotation from bed
bed gtf gff
updated 17 months ago by 43k • written 17 months ago by ▴ 580
0
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0
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1.3k
views
Comment: Comment: Compare two RNA-Seq log2fc tables
17 months ago by noodle ▴ 580
2
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1
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1.3k
views
Answer: Answer: Compare two RNA-Seq log2fc tables
17 months ago by noodle ▴ 580
0
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0
replies
2.3k
views
Comment: Comment: Laptop specs for MiniON
19 months ago by noodle ▴ 580
0
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1
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2.3k
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Comment: Comment: Laptop specs for MiniON
19 months ago by noodle ▴ 580
3
votes
1
reply
523
views
LSF bsub SSUSP job stdout
IBM LSF bsub
19 months ago by noodle ▴ 580
1
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0
replies
523
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Answer: Answer: LSF bsub SSUSP job stdout
19 months ago by noodle ▴ 580
0
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1
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894
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Comment: Comment: Explanation of BAM compression levels
19 months ago by noodle ▴ 580
5
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3
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894
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Explanation of BAM compression levels
compression BAM
updated 19 months ago by 3.9k • written 19 months ago by ▴ 580
2
votes
3
replies
862
views
picard CollectRnaSeqMetrics gene coverage
picard gatk CollectRnaSeqMetrics
19 months ago by noodle ▴ 580
2
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0
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862
views
Answer: Answer: picard CollectRnaSeqMetrics gene coverage
19 months ago by noodle ▴ 580
0
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0
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862
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Comment: Comment: picard CollectRnaSeqMetrics gene coverage
19 months ago by noodle ▴ 580
0
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0
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360
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RSamtools get picard tags
RSamtools samtools R RStudio
updated 11 months ago by 43k • written 20 months ago by ▴ 580
0
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0
replies
386
views
16S (18S) rRNA primer design
taxonomy primer design mopo16s
2.0 years ago by noodle ▴ 580
0
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0
replies
465
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RSEM gff 'parent' field
RNAseq transcriptomics RSEM
2.5 years ago by noodle ▴ 580
0
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0
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2.4k
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Comment: Comment: Convert transcriptomic bam to genomic bam
2.6 years ago by noodle ▴ 580
0
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1
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2.4k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
2.6 years ago by noodle ▴ 580
0
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2
replies
2.4k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
2.6 years ago by noodle ▴ 580
0
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1
reply
2.4k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
2.6 years ago by noodle ▴ 580
0
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0
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2.4k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
2.6 years ago by noodle ▴ 580
2
votes
11
replies
2.4k
views
Convert transcriptomic bam to genomic bam
genome bisulfite bam transcriptome
2.6 years ago by noodle ▴ 580
0
votes
0
replies
1.3k
views
Comment: Comment: AlphaFold on AWS metrics
2.6 years ago by noodle ▴ 580
172 results • Page 2 of 4
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