Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : questions
1
vote
2
replies
1.1k
views
Visualization of fold changes of candidate genes as heatmap across multiple independent experiments
RNA-Seq Visualization HeatMap Meta-analysis
3.5 years ago by VBer ▴ 200
2
votes
10
replies
1.9k
views
Mann-Whitney Test/Wilcoxon but for individual genes between case and control
RNA-Seq Statistics
3.6 years ago by VBer ▴ 200
1
vote
1
reply
837
views
Methodology: Meta-analysis and integration of published transcriptomics and proteomics data
RNA-Seq proteomics omics
3.7 years ago by VBer ▴ 200
0
votes
2
replies
3.0k
views
What is the importance of checking per base sequence content and per sequence GC content during Quality Control of NGS reads?
fastqc next-gen sequencing
updated 4.0 years ago by 20 • written 5.0 years ago by ▴ 200
2
votes
1
reply
2.4k
views
Calculating genetic distance from VCF to MAP format
population genomics
updated 4.0 years ago by 10k • written 4.0 years ago by ▴ 200
4
votes
6
replies
1.1k
views
blastn of reference genome CDS to subject genome gives range of hits, which do not translate into protein
BLAST
4.1 years ago by VBer ▴ 200
7
votes
9
replies
1.9k
views
Possible reasons mapping percentage abysmally low for miRNA reads?
miRNA miRDeep2
4.3 years ago by VBer ▴ 200
3
votes
3
replies
1.9k
views
NOISeq Fold Change calculation seems off?
RNA-Seq
updated 4.3 years ago by ▴ 310 • written 4.8 years ago by ▴ 200
1
vote
3
replies
1.5k
views
Remove homozygous reference SNPS present in ALL samples of multi-sample VCF file
vcf
4.4 years ago by VBer ▴ 200
1
vote
1
reply
2.2k
views
bcftools stats numbers do not match
bcftools
4.8 years ago by VBer ▴ 200
1
vote
8
replies
6.4k
views
Error using feature counts with DESeq2 : Cannot create DESeqData object
RNA-Seq DESeq2 featurecounts
updated 5.0 years ago by 20 • written 5.0 years ago by ▴ 200
7
votes
4
replies
5.2k
views
bcftools mpileup --max depth : What would be a reasonable setting for this option?
bcftools mpileup consensus
5.0 years ago by VBer ▴ 200
8
votes
2
replies
5.9k
views
Why do we need a .fai file and a .dict file of the reference during alignment and variant calling using GATK?
next-gen sequencing GATK alignment file_formats
updated 5.0 years ago by 161k • written 5.0 years ago by ▴ 200
3
votes
1
reply
2.3k
views
What is a Chimera with regards to NGS?
ngs next-gen sequencing
5.0 years ago by VBer ▴ 200
0
votes
0
replies
1.2k
views
Error running Masurca in the background: how to rectify memory allocation error
Assembly genome
5.1 years ago by VBer ▴ 200
2
votes
2
replies
1.4k
views
Comparing transcriptomic data of the same species from different developmental stages
RNA-Seq Comparative Transcriptomics
updated 6.3 years ago by 12k • written 6.3 years ago by ▴ 200
16 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6