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Comment: C: Too low FPKM values from StringTie
5.3 years ago by shawn.w.foley ★ 1.3k
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Comment: C: Too low FPKM values from StringTie
5.3 years ago by shawn.w.foley ★ 1.3k
1
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1
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3.0k
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Answer: C: Too low FPKM values from StringTie
5.3 years ago by shawn.w.foley ★ 1.3k
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1.3k
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Comment: C: Unequally pooling libraries for RNAseq?
5.3 years ago by shawn.w.foley ★ 1.3k
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1.3k
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Answer: A: Unequally pooling libraries for RNAseq?
5.3 years ago by shawn.w.foley ★ 1.3k
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2
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3.8k
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Answer: A: Get -400bp to +50bp sequence of gene from gff3 file
5.3 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.4k
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Comment: C: How to identify translocation events within cell lines
5.3 years ago by shawn.w.foley ★ 1.3k
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1
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1.4k
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Comment: C: How to identify translocation events within cell lines
5.3 years ago by shawn.w.foley ★ 1.3k
2
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7
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1.4k
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How to identify translocation events within cell lines
translocation whole genome seq panel
updated 5.3 years ago by ★ 2.5k • written 5.3 years ago by ★ 1.3k
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Comment: C: How to identify translocation events within cell lines
5.3 years ago by shawn.w.foley ★ 1.3k
0
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1
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7.1k
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Comment: C: After sorting bam file not able to index ?
5.4 years ago by shawn.w.foley ★ 1.3k
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1.2k
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Answer: A: Finding deferentially active regions with DESeq2
5.4 years ago by shawn.w.foley ★ 1.3k
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0
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1.5k
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Comment: C: Filtering fastq vs BAM for fragment size range
5.4 years ago by shawn.w.foley ★ 1.3k
1
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0
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2.0k
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Answer: A: Venn diagram generation criteria from RNAseq data
5.5 years ago by shawn.w.foley ★ 1.3k
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1
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1.5k
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Comment: C: miRNA mRNA interaction studies
5.5 years ago by shawn.w.foley ★ 1.3k
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1
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1.3k
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Comment: C: General Question to shRNA-Seq analysis
5.5 years ago by shawn.w.foley ★ 1.3k
0
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2
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1.3k
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Comment: C: Extract rows from file two having the 4th column ( which contain /1 /2 signs ) i
5.5 years ago by shawn.w.foley ★ 1.3k
2
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1
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1.3k
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Answer: A: Extract rows from file two having the 4th column ( which contain /1 /2 signs ) i
5.5 years ago by shawn.w.foley ★ 1.3k
0
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1
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1.3k
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Comment: C: Extract rows from file two having the 4th column ( which contain /1 /2 signs ) i
5.5 years ago by shawn.w.foley ★ 1.3k
2
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2
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11k
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Answer: A: GSEA, input metrics
5.7 years ago by shawn.w.foley ★ 1.3k
4
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3
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7.9k
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How do you compare GSEA results between treatments?
GSEA microarray
updated 6.2 years ago by • 0 • written 6.5 years ago by ★ 1.3k
0
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1
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11k
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Comment: C: Analyzing RNA-seq without replicates
6.3 years ago by shawn.w.foley ★ 1.3k
12
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6
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11k
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Analyzing RNA-seq without replicates
RNA-seq cufflinks DESeq2 isoem2 isode2
updated 6.3 years ago by 19k • written 6.3 years ago by ★ 1.3k
1
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1
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1.6k
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Comment: C: How to find the gene structure of a gene?
6.3 years ago by shawn.w.foley ★ 1.3k
1
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1
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27k
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Comment: C: R DESeq: What exactly is Variance Stabilizating Transformation?
6.3 years ago by shawn.w.foley ★ 1.3k
1
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0
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2.4k
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Answer: A: How do strand specific sequencing protocols work?
6.4 years ago by shawn.w.foley ★ 1.3k
4
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1
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5.2k
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Answer: A: Replicates for RNA-seq from 1 cell lines undergoing different treatments
6.4 years ago by shawn.w.foley ★ 1.3k
1
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1
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1.8k
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How do I extract normalized signal values for Affy SNP 6.0 chip using oligo or crlmm?
SNP bioconductor oligos crlmm
6.4 years ago by shawn.w.foley ★ 1.3k
1
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0
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1.8k
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Answer: A: How do I extract normalized signal values for Affy SNP 6.0 chip using oligo or c
6.4 years ago by shawn.w.foley ★ 1.3k
0
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0
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1.5k
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Comment: C: When performing Fisher's exact test, should I consider all annotated or all dete
6.5 years ago by shawn.w.foley ★ 1.3k
3
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2
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1.5k
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When performing Fisher's exact test, should I consider all annotated or all detected transcripts?
RNA-Seq fisher's test expression statistics
updated 6.5 years ago by ▴ 990 • written 6.5 years ago by ★ 1.3k
131 results • Page 3 of 3
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