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Answer: Answer: Bedtools merge minimum overlap?
2 days ago by harold.smith.tarheel ★ 4.9k
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396
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Answer: Answer: How can I get the sequences of the first 20nt of introns and the last 250nt of i
10 weeks ago by harold.smith.tarheel ★ 4.9k
2
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0
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722
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Answer: Answer: BBtools bug in reporting the number of substitutions in the console output, it s
5 months ago by harold.smith.tarheel ★ 4.9k
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1
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580
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Answer: Answer: Identification of transgene insertion site using Illumina DNA Sequencing
8 months ago by harold.smith.tarheel ★ 4.9k
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0
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485
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Answer: Answer: VCF file format
16 months ago by harold.smith.tarheel ★ 4.9k
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0
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707
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Answer: Answer: Generating synthetic TB reads
19 months ago by harold.smith.tarheel ★ 4.9k
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0
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646
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Answer: Answer: How to search the human genome for sequences that differ from a given sequence b
updated 22 months ago by 142k • written 22 months ago by ★ 4.9k
3
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1
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2.8k
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Answer: Answer: Extract reads overlapping a specific region in bam file
3.0 years ago by harold.smith.tarheel ★ 4.9k
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1
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717
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Answer: Answer: Annovar Exonic label
3.0 years ago by harold.smith.tarheel ★ 4.9k
1
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0
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799
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Answer: A: Filter only SNPs in 1000 Genomes Data Slicer
3.4 years ago by harold.smith.tarheel ★ 4.9k
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0
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3.4k
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Answer: A: GATK VariantFiltration does not filter
3.6 years ago by harold.smith.tarheel ★ 4.9k
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1
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1.0k
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Answer: A: comparison of variants between WGS samples
3.7 years ago by harold.smith.tarheel ★ 4.9k
1
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0
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3.0k
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Answer: A: Tools to filter the heterozygous SNPs with biased allele depth (AD) values in vc
4.3 years ago by harold.smith.tarheel ★ 4.9k
2
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0
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4.0k
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Answer: A: Where can I do an online project to get some hands on experience with NGS data a
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 4.9k
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1
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3.7k
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Answer: A: Automating pre-alignment (and post-alignment) quality control
updated 4.3 years ago by 43k • written 8.3 years ago by ★ 4.9k
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3.7k
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Answer: A: How can I compare two columns of a two VCF files
updated 4.4 years ago by 43k • written 8.3 years ago by ★ 4.9k
7
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16k
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Answer: A: How do I explain to my non-bioinformatician labmates how to interpret principal
updated 4.4 years ago by 43k • written 8.3 years ago by ★ 4.9k
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2
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5.0k
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Answer: A: Reference Genome of Saccharomyces cerevisiae S288C.
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.9k
0
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1
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20k
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Answer: A: Error when trying to use samtools to convert a sam files to a bam file
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.9k
4
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2
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5.0k
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Answer: A: Varying Sample Size vs Read Depth, Read Length, and Single vs Paired end to opti
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.9k
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0
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4.4k
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Answer: A: Picard Error with SAM File
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.9k
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0
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1.6k
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Answer: A: in bcftools mpileup output, the DP number is not equal to depth in I16 tag
4.4 years ago by harold.smith.tarheel ★ 4.9k
1
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0
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3.8k
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Answer: A: High Kmer Content in middle of the read
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 4.9k
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1
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3.0k
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Answer: A: bcl to fastq Conversion
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 4.9k
3
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0
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3.0k
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Answer: A: Per base sequence quality before and after truseq adapters removal
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 4.9k
3
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2
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4.0k
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Answer: A: Database for C. elegans TFBS
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 4.9k
4
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1
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1.7k
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Answer: A: Interpreting bbduk histogram headers and contents
4.5 years ago by harold.smith.tarheel ★ 4.9k
3
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2
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3.8k
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Answer: A: Extract sequences based on keywords in headers (no perl or python code)
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 4.9k
3
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1
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1.1k
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Answer: A: The same location shares different GeneBank Accession in IGV and UCSC?
4.5 years ago by harold.smith.tarheel ★ 4.9k
1
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1
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5.0k
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Answer: A: Why are there many reads with green color in IGV of RNA-seq data?
4.8 years ago by harold.smith.tarheel ★ 4.9k
0
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0
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2.1k
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Answer: A: targets in a bed at or above a coverage
4.8 years ago by harold.smith.tarheel ★ 4.9k
0
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2
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4.5k
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Answer: A: NGS Data storage solutions for small organisations or big labs
4.9 years ago by harold.smith.tarheel ★ 4.9k
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0
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2.5k
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Answer: A: Keeping only common variants in the merged VCF file
4.9 years ago by harold.smith.tarheel ★ 4.9k
2
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1
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1.3k
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Answer: A: Efficent Estimation of Sequencing Coverage
5.2 years ago by harold.smith.tarheel ★ 4.9k
3
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1
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7.6k
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Answer: A: bcftools doesn't normalize the vcf file
5.3 years ago by harold.smith.tarheel ★ 4.9k
0
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0
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994
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Answer: A: Viral vector integration site detection tool
5.3 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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1.3k
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Answer: A: Missing sequence from a cosmid de novo assembly
5.4 years ago by harold.smith.tarheel ★ 4.9k
0
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0
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1.2k
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Answer: A: Find unique non overlapping intervals between two files?
5.5 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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3.6k
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Answer: A: Combining snp and indel vcf files with GATK4
5.6 years ago by harold.smith.tarheel ★ 4.9k
5
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0
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18k
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Answer: A: why PCA for RNA-Seq but tSNE for scRNA-seq?
6.0 years ago by harold.smith.tarheel ★ 4.9k
0
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0
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4.6k
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Answer: A: Error in samtools view
6.1 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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2.2k
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Answer: A: What cigar to use to count reads with last base mismatch in Rsamtools?
6.2 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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2.1k
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Answer: A: How do we find the number of sequences with terminal mismatches?
6.2 years ago by harold.smith.tarheel ★ 4.9k
5
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1
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2.7k
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Answer: A: look for sequences containing a specific motif
6.2 years ago by harold.smith.tarheel ★ 4.9k
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0
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1.9k
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Answer: A: Gene distribution along the chromosomes
6.2 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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3.8k
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Answer: A: A very short gene with very high TPM
6.3 years ago by harold.smith.tarheel ★ 4.9k
2
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1
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4.5k
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Answer: A: vcf files: counting number of variants in genomic windows of chosen size
6.4 years ago by harold.smith.tarheel ★ 4.9k
2
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1
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2.8k
views
Answer: C: Bedtools intersect returns 0, intersections present on IGV
6.4 years ago by harold.smith.tarheel ★ 4.9k
2
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0
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2.0k
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Answer: A: Why "Motile sperm domain-containing protein 2" has nothing to do with "sperm"?
6.5 years ago by harold.smith.tarheel ★ 4.9k
2
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0
replies
2.9k
views
Answer: A: Nucleotide coverage if >5 reads
6.5 years ago by harold.smith.tarheel ★ 4.9k
198 results • Page 1 of 4
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