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ericrkofman
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win
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Trying to understand warning from MACS2 about too few paired peaks and differing results in DiffBind
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Comment: Overlapping clusters for different biological conditions: Seurat, UMAP
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What is the need of PBMC in your analysis ? If none, removing them from the beginning will allow your clusters to be more specific to your …
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I believe `sample_id` are your replicates in either `patient` or `control`.
You can do it manually by normalizing the number of cells yo…
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Hi!
Did you manage to fix this?
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Looking at both `nCount` and `MT` the profile are cut at your thresholds, suggesting that you simply don't have cells with >2000(ish) genes…
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See me edit I just made for the fastq check.
Comment: Bowtie 1.3.1 alignment error as array 21720,23124 produces sam bam files
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Thanks will check and update here.
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