updated 1 hour ago by
alanh
▴
170
•
written 7.1 years ago by
jonessara770
▴
240
38
votes
12
replies
31k
views
9 follow
4
votes
5
replies
4.3k
views
updated 18 hours ago by
dario.garvan
▴
520
•
written 7.2 years ago by
d-cameron
★
2.9k
1
vote
3
replies
797
views
updated 23 hours ago by
sansan_96
▴
90
•
written 2.7 years ago by
boymin2020
▴
80
2
votes
11
replies
641
views
1
vote
14
replies
614
views
4
votes
7
replies
421
views
updated 5 hours ago by
marco.barr
▴
130
•
written 2 days ago by
diqixiaoyaoer
▴
20
4
votes
9
replies
378
views
4 hours ago by
Gabriel R.
★
2.9k
3
votes
4
replies
263
views
0
votes
4
replies
258
views
6
votes
4
replies
253
views
0
votes
4
replies
249
views
9 hours ago by
kilcdincer
▴
10
1
vote
5
replies
237
views
updated 19 hours ago by
Ram
43k
•
written 1 day ago by
manuelmourato25
•
0
1
vote
9
replies
219
views
0
votes
3
replies
224
views
updated 10 hours ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
saifulislam99121
•
0
1
vote
4
replies
224
views
2
votes
3
replies
213
views
1
vote
5
replies
205
views
2
votes
2
replies
189
views
updated 21 hours ago by
Ram
43k
•
written 1 day ago by
txema.heredia
▴
130
1
vote
1
reply
184
views
updated 22 hours ago by
Jordan M Eizenga
▴
460
•
written 11 days ago by
sarumonsus
▴
10
0
votes
3
replies
177
views
updated 1 hour ago by
andres.firrincieli
3.6k
•
written 1 day ago by
mavy
▴
10
0
votes
1
reply
168
views
updated 7 hours ago by
GenoMax
142k
•
written 15 hours ago by
huxiangyulove
•
0
1
vote
1
reply
154
views
0
votes
2
replies
149
views
updated 10 hours ago by
Pierre Lindenbaum
161k
•
written 16 hours ago by
melissachua90
▴
70
0
votes
1
reply
149
views
1
vote
1
reply
141
views
updated 14 hours ago by
Nyksubuz
▴
20
•
written 1 day ago by
mirwa.zidi93
•
0
0
votes
2
replies
136
views
updated 2 hours ago by
Zhenyu Zhang
★
1.2k
•
written 18 hours ago by
Ngrin
•
0
0
votes
1
reply
132
views
0
votes
4
replies
103
views
1
vote
0
replies
92
views
updated 19 hours ago by
Ram
43k
•
written 1 day ago by
carlopecoraro2
★
2.5k
0
votes
1
reply
81
views
0
votes
0
replies
78
views
23 hours ago by
sainavyav22
•
0
0
votes
0
replies
73
views
0
votes
0
replies
56
views
0
votes
0
replies
50
views
0
votes
0
replies
40
views
updated 5 hours ago by
GenoMax
142k
•
written 5 hours ago by
yura.grabovska
▴
90
0
votes
0
replies
26
views
1 hour ago by
qudrat.nii
▴
10
0
votes
0
replies
16
views
58 minutes ago by
ijarne
•
0
0
votes
0
replies
11
views
0
votes
0
replies
7
views
Recent Votes
Recent Locations •
All
United States, just now
United States, 1 minute ago
United States, 2 minutes ago
United States, 3 minutes ago
United States, 3 minutes ago
United States, 4 minutes ago
California, USA, 4 minutes ago
Recent Awards •
All
Recent Replies
Comment: Reconstruction of locus, order contigs
by
dthorbur
★
2.0k
[Here](https://www.biostars.org/p/9544689/) is a forum post that may answer your question.
Comment: zero TPM for many gene including housekeeping when using kallisto
by
ashkan
▴
160
@atpoint I checked all transcripts of GAPDH. they all have 0 TPM.
Comment: how to treat the replicates while performing WGCNA
by
andres.firrincieli
3.6k
> 1) I do not want to merge the MEs rather I asked about replicates, as
> some replicates of same sample are showing different behavior for…
Comment: How to systematically check if a bam file is truncated
by
alanh
▴
170
For more details about what `samtools quickcheck` actually checks for, add a few `-v`'s to the command line.
$ samtools quickcheck -…
Comment: How to handle duplicated genes in TCGA data?
by
Zhenyu Zhang
★
1.2k
Second what is said above, ensembl_id is the unique identifier.
As a good bioinformatics habit, always use unique identifier for your anal…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
It doesn't work. The annotation labels are still in a default fontsize. I cant find a way to set the fontsize.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
43k
Yes. The solution to most things with ComplexHeatmap is to play around with parameters.
Comment: Reconstruction of locus, order contigs
by
BATMAN
•
0
I do not want to re-annotate the genome. I ask if there is a way to extract the region aligned with the mauve, in .gbk format.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
Thank you. What exactly do you mean? Changing `ha = rowAnnotation(text = anno_mark(at = mark_at, labels = gene_names_interesting_in_cluster…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
43k
Try tweaking the `gp` of the rowAnnotation instead of tweaking the `annotation_name_gp` - that might do the trick.
Comment: Help! Reconstruction of locus, order contigs
by
dthorbur
★
2.0k
I don't understand your comment. What do you mean?
> my idea is not to have to write it down
If you have an alignment already, why can't…
Comment: Details on salmon index
by
Rob
6.6k
Hi Lorenzo,
That is correct. The initial version of salmon used the RapMap index explained above. When we published the selective align…
Comment: Help! Reconstruction of locus, order contigs
by
BATMAN
•
0
Thanks for your reply, my idea is not to have to write it down. What I have is an alignment of the .gbk from the progressiveMauve. It would…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
Gabriel R.
★
2.9k
I did some digging aroumd, no static binary. Plus it seems you need to roll your own program.
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
Gabriel R.
★
2.9k
We tested it, however, it does not seem to produce a fast a file of the results or anything that we can easily parse. It produces a CIGAR a…
Traffic: 2384 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6