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Comment: BiomartException: Query ERROR for existing dataset in BioMart
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The dataset you want (taestivum_eg_gene) exists within the "plants_mart" schema, not the default schema. Your current code assumes the defa…
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You could use [this][1]
[1]: https://ggplot2.tidyverse.org/reference/geom_segment.html
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It might be because the gene symbol is not found in the KEGG database. Add some extra error handling before parsing the results or do a man…
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Thank you for your reply.
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It seems that Alexandrov's [structural variant and copy number signatures][1] estimated by the [SigProfiler software ecosystem][2] aren't c…
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Then you may want to see if a program like `lastz` ([**LINK**][1]) may be useful.
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What is the purpose of this tool? I have `~/bin` in my $PATH and I soft-link all executables I need to that location so why install a new t…
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Can you try this?
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Thank you for the response but it does not change anything.
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I have not tested but you could try something like below-
seuratobj$seurat_clusters[seuratobj$seurat_clusters==5]=0
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I know about it, isn't there a simple C++ static binary?
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needle is great! but it does not handle sequences of 100k or so.
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Please use the formatting bar (especially the `code` option) to present your post better. You can use backticks for inline code (\`text\` b…
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The point is that you need to feed the ambient algorithm a clustering list as input. This way, it checks for genes present in the soup vs g…
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Wait, so the magnitudes of the PCs are in the thousands? That's not normal for RNASeq.
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