3
votes
3
replies
238
views
1
vote
7
replies
406
views
2
votes
3
replies
318
views
3
votes
2
replies
185
views
0
votes
0
replies
94
views
0
votes
0
replies
97
views
updated 5 days ago by
Ram
44k
•
written 5 days ago by
emmanouil.a
▴
120
11
votes
13
replies
6.8k
views
7 follow
0
votes
1
reply
273
views
updated 5 days ago by
韩雨
•
0
•
written 6 weeks ago by
solomoncharles77
▴
90
5
votes
4
replies
5.2k
views
6 follow
1
vote
1
reply
140
views
0
votes
0
replies
66
views
7
votes
3
replies
13k
views
updated 5 days ago by
Akash D
▴
60
•
written 6.5 years ago by
rob.costa1234
▴
310
0
votes
1
reply
157
views
updated 5 days ago by
Ram
44k
•
written 5 days ago by
mohamadzare6022
▴
10
7
votes
13
replies
852
views
7 follow
0
votes
0
replies
106
views
0
votes
0
replies
97
views
0
votes
0
replies
98
views
6 days ago by
Jacob
•
0
3
votes
8
replies
887
views
updated 6 days ago by
a.penatauber
•
0
•
written 3 months ago by
Lucas R.F.
▴
20
0
votes
0
replies
99
views
0
votes
4
replies
231
views
6 days ago by
reza
▴
300
0
votes
1
reply
150
views
1
vote
2
replies
251
views
1
vote
3
replies
244
views
0
votes
0
replies
111
views
5
votes
3
replies
216
views
updated 6 days ago by
GenoMax
142k
•
written 6 days ago by
Christopher
▴
10
0
votes
0
replies
126
views
5 days ago by
Tim
•
0
2
votes
6
replies
336
views
5 days ago by
anikcropscience
▴
230
0
votes
0
replies
104
views
updated 6 days ago by
Ram
44k
•
written 6 days ago by
letizia.ottaviani
•
0
0
votes
6
replies
298
views
updated 6 days ago by
ATpoint
82k
•
written 6 days ago by
machaalani29
•
0
0
votes
0
replies
104
views
updated 6 days ago by
Ram
44k
•
written 6 days ago by
carlopecoraro2
★
2.5k
0
votes
1
reply
134
views
3
votes
2
replies
213
views
0
votes
3
replies
307
views
updated 6 days ago by
colindaven
6.4k
•
written 8 days ago by
Bjorn
•
0
0
votes
1
reply
159
views
updated 6 days ago by
Ram
44k
•
written 7 days ago by
He11oJe11o
•
0
0
votes
0
replies
92
views
0
votes
3
replies
224
views
0
votes
1
reply
157
views
0
votes
0
replies
105
views
7 days ago by
dlera.lozano
▴
10
0
votes
0
replies
123
views
3
votes
6
replies
358
views
updated 6 days ago by
Ram
44k
•
written 7 days ago by
anasjamshed
▴
120
0
votes
1
reply
189
views
updated 7 days ago by
andersdetermig
▴
20
•
written 8 days ago by
Christopher
•
0
0
votes
2
replies
444
views
1
vote
10
replies
650
views
0
votes
4
replies
250
views
2
votes
4
replies
284
views
6 days ago by
Arton
▴
10
1
vote
3
replies
214
views
0
votes
3
replies
196
views
3
votes
2
replies
192
views
6 days ago by
Tuấn Anh
•
0
2
votes
4
replies
1.2k
views
5 days ago by
Aspire
▴
330
2
votes
4
replies
363
views
Recent Votes
Recent Locations •
All
Australia, 4 minutes ago
United States, 8 minutes ago
Pakistan, 19 minutes ago
United States, 21 minutes ago
Japan, 21 minutes ago
Perth, Australia, 23 minutes ago
United States, 24 minutes ago
Recent Awards •
All
Teacher to
John Marshall
3.1k
Autobiographer to
Nat.Nataren
▴
20
Scholar to
geneontologyhelp
▴
410
Popular Question to
Pei
▴
170
Popular Question to
Erin Haskell
▴
470
Popular Question to
José
▴
10
Popular Question to
George
▴
10
Recent Replies
Comment: polygenic risk score
by
ashaneev07
▴
20
Can't we calculate the prs of a single patient data with respect to GWAS data for predicting the risk for particular diseases?
Answer: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
Gordon Smyth
★
7.2k
It is very common for studies like this to show no significant DE. Human studies like this where comparisons are made between diseases and …
Comment: Invalid CIGAR after using bam clipOverlap
by
MboiTui
▴
20
update. The error persists. With ValidateSamFile I get no error until i use MarkDuplicates.
Then for the MarkDuplicates output I get:
…
Comment: when I use htslib to write a bam. Error of "truncated file" shows by samtools
by
Aaron
▴
10
Thanks very much.
Answer: help in changing Y scale in R
by
LauferVA
4.2k
Hello @ab33b6d7 ,
Below is approximately the code block you provided, with a few additional lines added.
Each of the new lines has
> …
Comment: 2 PhD Students in single-cell bioinformatics
by
Uzma
•
0
I want to apply for this PhD position. I did MSc Zoology and MPhil biosciences.
Comment: Rseqc infer_experiment.py: 0 usable reads sampled and unknown data type
by
mazegriff
•
0
Hi pubsurfted,
I ran into the same issue using a reference transcriptome with HISAT2 from the Ensembl database. For others with similar e…
Comment: Intersection of multiple vcf files
by
Jeremy Leipzig
22k
isec is pretty awful for these set operations - especially since individual samples present alleles, not lines in a VCF file. If you can co…
Comment: help in changing Y scale in R
by
Medhat
9.7k
Maybe try to calculate min and max
combined_min <- min(a_filtered$value, a_filtered_tv$value, na.rm = TRUE)
combined_max <- max(a_…
Answer: help in changing Y scale in R
by
ATpoint
82k
Use `+ylim(c(lower, upper))`. Either set manually, or query both `a_filtered` and `a_filtered_tv` for the minimum and maximum values that g…
Comment: Error with pheatmap - 'from' must be a finite number
by
zx8754
11k
I am not familiar with deseq data, but if it makes sense, remove rows/columns that have only NAs.
#remove rows
x<- mat.z[ rowSums(…
Answer: when I use htslib to write a bam. Error of "truncated file" shows by samtools
by
John Marshall
3.1k
There are several problems with this code:
1. You have not set `b->l_data`, which here should be set to the same value as `b->m_data`. T…
Comment: Best practices in Fungal Genome Assembly
by
Umer
▴
50
Should I use both Recon and Pilon for polshing ? Recon uses Long-reads and Pilon uses short-read.
if both should be used, is their any pref…
Comment: Mutation counts corrected by number of samples
by
garcesj
▴
50
How come? If I have a pro-tumorigenic product, for example, wouldn't this comparison be valid?
Comment: How to Convert CNV Data to CNA Format for Reproducing Results with the Padma Pac
by
Ngrin
•
0
Thanks @Zhenyu Zhang for your response. I have just looked at the files you mentioned. Do you have any recommended package or code snippet …
Traffic: 1297 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6