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Limit : this week
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192 results • Page
2 of 4
Sort: Votes
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Votes
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1
vote
4
replies
396
views
Limma Analysis Agilent Microarray Data (GPL1708)
Microarray
Limma
Agilent
6 days ago by
hagl
▴ 10
1
vote
7
replies
527
views
ScRNA data question
scRNA
Vlnplot
Samples
updated 6 days ago by
bk11
★ 2.4k • written 10 days ago by
starswillfade
▴ 10
1
vote
1
reply
233
views
Polishing genome assembly
polishing
Nanopore
PacBio
updated 5 days ago by
Michael
54k • written 6 days ago by
Lissa Cruz Saavedra
• 0
1
vote
2
replies
228
views
Need help for downloading arabdopsis thaliana reference genome fasta file and gtf file
Arabidopsis-thaliana
gtf
reference-genome
updated 5 days ago by
Ram
43k • written 5 days ago by
Ravita
• 0
1
vote
8
replies
476
views
Downsampling fastq file
downsample
fastq
5 days ago by
marco.barr
▴ 90
1
vote
3
replies
280
views
What does 'bundle_uuid' refer to in this metadata sheet?
SRA
illumina
GEO
metadata
updated 5 days ago by
GenoMax
142k • written 5 days ago by
jeffrey.maurer.informatics
• 0
1
vote
1
reply
171
views
Including plasmid in alignment
Bacteria
Transcriptomics
BOWTIE2
STAR
5 days ago by
heelpPlease
• 0
1
vote
2
replies
288
views
Minimum RAM and Storage requirement for creating PSSM using ncbi-blast-2.2.30+-x64-linux
blast
pssm
4 days ago by
Nafi
• 0
1
vote
3
replies
303
views
DESeq2 processing problems
deseq2
R
updated 4 days ago by
ATpoint
82k • written 4 days ago by
jagdish7921
• 0
1
vote
2
replies
246
views
POSSUM not working due to incompatible pssm file
fasta
pse-pssm
pssm
POSSUM
3 days ago by
rianna.collins
• 0
1
vote
0
replies
186
views
News:
Landscape Genomics course in Switzerland
LFMM
Landscape-Genomics
Sambada
R
Local-Adaptation
3 days ago by
carlopecoraro2
★ 2.5k
1
vote
4
replies
1.1k
views
Filtering qscore on dorado
dorado
filtering
QC
nanopore
Guppy
3 days ago by
eebloom
▴ 80
1
vote
1
reply
168
views
Super ehancers
enhancers
updated 3 days ago by
jared.andrews07
★ 16k • written 3 days ago by
Oburah
• 0
1
vote
1
reply
162
views
Download eQTL data of one specific gene for all tissues from GTEx
eQTL
GTEx
updated 3 days ago by
bk11
★ 2.4k • written 3 days ago by
Jeol
▴ 20
1
vote
1
reply
137
views
Discrepancy in read counts from fastq
downsampling
fastq
updated 3 days ago by
Ram
43k • written 3 days ago by
marco.barr
▴ 90
1
vote
3
replies
229
views
DiffBind: no peaks in DBA
MACS2
DiffBind
ChIP-seq
updated 3 days ago by
jared.andrews07
★ 16k • written 3 days ago by
yvonneh
▴ 10
1
vote
14
replies
2.3k
views
Extract gRNA sequence using cutadapt
cutadapt
trimming
crispr
sequencing
updated 3 days ago by
GenoMax
142k • written 4.5 years ago by
Swimming bird
▴ 20
1
vote
3
replies
249
views
Bedtools merge minimum overlap?
bedtools
genomics
updated 3 days ago by
Alex Reynolds
35k • written 3 days ago by
SJP
• 0
1
vote
3
replies
273
views
Does comparing two different groups to a common third group introduce bias in the analysis?
DESEQ
RNAseq
updated 2 days ago by
ATpoint
82k • written 3 days ago by
Qi
• 0
1
vote
5
replies
328
views
Introduce SNPs on FASTA
simulation
snps
haplotypes
pharmacogenetics
2 days ago by
Riccardo
▴ 10
1
vote
3
replies
232
views
Odd alignment question/finding
Alignment
updated 2 days ago by
barslmn
★ 2.1k • written 4 days ago by
poordumbsillyidiot
• 0
1
vote
7
replies
435
views
Downsampling long-read BAM files
nanopore
BAM
QC
ONT
downsampling
2 days ago by
eebloom
▴ 80
1
vote
2
replies
278
views
read length in structural variant calling
nanopore
SV
QC
ONT
variant
2 days ago by
eebloom
▴ 80
1
vote
2
replies
234
views
RNA-seq data for deep learning classification
rna-seq
2 days ago by
yahn
• 0
1
vote
6
replies
338
views
Do I need to go back and filter my long-reads?
alignment
nanopore
filtering
QC
ONT
updated 2 days ago by
GenoMax
142k • written 20 days ago by
eebloom
▴ 80
1
vote
4
replies
283
views
Segmentation error while using a tool
smalt
updated 1 day ago by
Mensur Dlakic
★ 27k • written 2 days ago by
Ruqaiya
• 0
1
vote
1
reply
164
views
DSEQ2 analysis
DESEQ2
logfoldchange
updated 1 day ago by
Ram
43k • written 2 days ago by
adi.gershon1
• 0
1
vote
2
replies
1.1k
views
News:
The GDC Legacy Archive is retiring soon.
genomic-data-commons
tcga
gdc
21 hours ago by
Zhenyu Zhang
★ 1.2k
1
vote
2
replies
217
views
Downloading full alignments from Pfam
pfam
14 hours ago by
bef1
• 0
1
vote
2
replies
225
views
Association study using SNP data
Association
Allele
Parentage
SNP
14 hours ago by
drajangirija
• 0
1
vote
3
replies
222
views
TaxID mapping file
annotation
blobtools
RNAseq
decontamination
transcriptomes
11 hours ago by
Lada
▴ 30
1
vote
2
replies
150
views
install package
package
install
updated 9 hours ago by
Pine
▴ 10 • written 14 hours ago by
snajafy
• 0
1
vote
11
replies
5.5k
views
Truncated Bam Error
R
next-gen
sequencing
software error
updated 59 minutes ago by
guanghao
• 0 • written 6.1 years ago by
vivekruhela
▴ 20
1
vote
3
replies
233
views
ERROR When Using Ensembl Plants Biomart Wget API
biomart
plant
ensembl
1 minute ago by
Dora
▴ 10
0
votes
0
replies
96
views
Tassel 5 GBS: GBSSeqToTagDBPlugin producing empty database
GBS
Tassel5
4 days ago by
meck
• 0
0
votes
0
replies
124
views
Looking for the best way to interpret these data
RNA-seq
ontology
GO
updated 4 days ago by
Ram
43k • written 4 days ago by
Oscar
▴ 10
0
votes
1
reply
205
views
GATK won't produce figures while analyzing covariates to generate 'recal_plots.pdf'
GATK
recalibration
updated 4 days ago by
GenoMax
142k • written 4 days ago by
mgranada3
▴ 30
0
votes
1
reply
585
views
Basic stats in hierfstat
Fst
stats
hierfstat
updated 4 days ago by
mdav
• 0 • written 18 months ago by
Zoe
• 0
0
votes
0
replies
96
views
Combining Methylation Microarray data from different platforms
Microarray
DNA
EPIC
450K
Methylation
4 days ago by
James
▴ 10
0
votes
1
reply
275
views
Is there a way to increase the automatic label text size in Cytoscape?
Cytoscape
updated 4 days ago by
Scooter
▴ 280 • written 10 days ago by
avocado123
• 0
0
votes
2
replies
161
views
Longitudinal analysis of subpopulations: which approach is better?
differential-expression
DEG
model
6 days ago by
Lluís R.
★ 1.2k
0
votes
0
replies
96
views
Successfully identified and Masked rpeats using RM. What Next?
sequence
annotation
repeatmasker
illumina
assembly
3 days ago by
Vijith
▴ 30
0
votes
0
replies
98
views
Use of annotation of integrated Seurat object in single sample
Seurat
3 days ago by
Bine
▴ 60
0
votes
0
replies
76
views
Problem with Seurat package in PercentageFeatureSet function
cell
single
22 hours ago by
Yoosef
▴ 60
0
votes
1
reply
222
views
Subsetting and merging back Seurat Object brings different results
Seurat
3 days ago by
Bine
▴ 60
0
votes
0
replies
115
views
News:
Online course: Genome Annotation
Genome-Assembly
Genome-Annotation
6 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
115
views
human gut metagenome taxonomy profile table and KO profile table from big cohort
metagenome
gut
human
6 days ago by
fanglujing
▴ 60
0
votes
0
replies
133
views
Are some metagenomes too complex for MAGs?
metagenomics
metagenome
MAGs
assembly
6 days ago by
Jacob
• 0
0
votes
1
reply
75
views
Error in checkFullRank(modelMatrix) : the model matrix is not full rank, so the model cannot be fit as specified.
DESeq2
8 hours ago by
mropri
▴ 150
0
votes
1
reply
214
views
Finding batch and outlayers
Pca
updated 6 days ago by
christopher medway
▴ 460 • written 7 days ago by
Tigran
• 0
192 results • Page
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